RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 STYXQ8WUJ0 223 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 ANKRD49Q8WVL7 239 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 MRPS31Q92665 395 aaKnown RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 SGF29Q96ES7 293 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 DDX50Q9BQ39 737 aaKnown RBP12.87□□□□□ -0.35
VAPB-203ENST00000463370 SLC46A2Q9BY10 475 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
VAPB-203ENST00000463370 CFAP73A6NFT4 308 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 TRIM13O60858 407 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 RFPL2O75678 378 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 KLHL2O95198 593 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 MYL4P12829 197 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 CRABP2P29373 138 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 POU4F1Q01851 419 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 TUBB3Q13509 450 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 CDH18Q13634 790 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 HECTD2Q5U5R9 776 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 ZNF549Q6P9A3 640 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 ZYG11AQ6WRX3 759 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 TREML1Q86YW5 311 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 FAM217AQ8IXS0 508 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 OR6K2Q8NGY2 324 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 PDCD6IPQ8WUM4 868 aaKnown RBP12.86□□□□□ -0.35
VAPB-203ENST00000463370 TCEAL4Q96EI5 215 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 PTCD3Q96EY7 689 aaKnown RBP12.86□□□□□ -0.35
VAPB-203ENST00000463370 NUDCD1Q96RS6 583 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 LRMDAQ9H2I8 198 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 MAFFQ9ULX9 164 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 STK38LQ9Y2H1 464 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 ASB3Q9Y575 518 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 NEMP2A6NFY4 417 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 SMAD6O43541 496 aaKnown RBP12.86□□□□□ -0.35
VAPB-203ENST00000463370 DLX3O60479 287 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
VAPB-203ENST00000463370 LATS1O95835 1130 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
VAPB-203ENST00000463370 TIAL1Q01085 375 aaKnown RBP eCLIP12.86□□□□□ -0.35
VAPB-203ENST00000463370 CSHL1Q14406 222 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 TMEM240Q5SV17 173 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 CCDC91Q7Z6B0 441 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 MFN1Q8IWA4 741 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 GPR65Q8IYL9 337 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 DNMT3BQ9UBC3 853 aaKnown RBP12.86□□□□□ -0.35
VAPB-203ENST00000463370 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
VAPB-203ENST00000463370 PLXNA4Q9HCM2 1894 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 UNC80Q8N2C7 3258 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 CD3EAPO15446 510 aaKnown RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 PRAMEF12O95522 483 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 ADH1AP07327 375 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 ABL2P42684 1182 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 GRIA4P48058 902 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 POLD2P49005 469 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 CLCN5P51795 746 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 ALDH18A1P54886 795 aaKnown RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 SLC7A9P82251 487 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 CREMQ03060 361 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 UBAP2LQ14157 1087 aaKnown RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 GLT6D1Q7Z4J2 308 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 CDKN2AIPNLQ96HQ2 116 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 MIPEPQ99797 713 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 SHCBP1LQ9BZQ2 653 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 TM6SF2Q9BZW4 377 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 TLE6Q9H808 572 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 MIA3Q5JRA6 1907 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 LEFTY2O00292 366 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 MGRN1O60291 552 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 GLP2RO95838 553 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 COL6A2P12110 1019 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 KCNA5P22460 613 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 CDKN1CP49918 316 aaPredicted RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 NAGLUP54802 743 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 SLC12A2P55011 1212 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 SPDYAQ5MJ70 313 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 NCEH1Q6PIU2 408 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 HTR3DQ70Z44 454 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.85□□□□□ -0.35
VAPB-203ENST00000463370 OR4L1Q8NH43 312 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 RILPQ96NA2 401 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 TSNARE1Q96NA8 513 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 GPAMQ9HCL2 828 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 SAR1AQ9NR31 198 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.85□□□□□ -0.35
VAPB-203ENST00000463370 VWA7Q9Y334 891 aa12.85□□□□□ -0.35
VAPB-203ENST00000463370 CAPN14A8MX76 684 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 WISP3O95389 354 aaPredicted RBP12.84□□□□□ -0.35
VAPB-203ENST00000463370 HSPA4LO95757 839 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 GLUD1P00367 558 aa12.84□□□□□ -0.35
VAPB-203ENST00000463370 CCDC166P0CW27 439 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms