RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 KIF19Q2TAC6 998 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 SLC9B1Q4ZJI4 515 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 SETMARQ53H47 684 aaPredicted RBP3.81□□□□□ -1.8
KDM3A-208ENST00000463013 PPP6R3Q5H9R7 873 aaPredicted RBP3.81□□□□□ -1.8
KDM3A-208ENST00000463013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.81□□□□□ -1.8
KDM3A-208ENST00000463013 ZC3HC1Q86WB0 502 aaKnown RBP3.81□□□□□ -1.8
KDM3A-208ENST00000463013 HEATR4Q86WZ0 1026 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 PGBD5Q8N414 524 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 SCCPDHQ8NBX0 429 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 ZNF114Q8NC26 417 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 KLHL29Q96CT2 875 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 TBATAQ96M53 351 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 H2AFJQ9BTM1 129 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 C1QTNF4Q9BXJ3 329 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 DDX4Q9NQI0 724 aaKnown RBP3.81□□□□□ -1.8
KDM3A-208ENST00000463013 PGAP2Q9UHJ9 254 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 SARDHQ9UL12 918 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 A4GNTQ9UNA3 340 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 CDC14AQ9UNH5 594 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 GTF2A1LQ9UNN4 478 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 NFS1Q9Y697 457 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 CYP46A1Q9Y6A2 500 aa3.81□□□□□ -1.8
KDM3A-208ENST00000463013 ARID4BQ4LE39 1312 aaPredicted RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 A0A1W2PQM1 296 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 hDV102S1A0JD36 115 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 PLSCR5A0PG75 271 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SERINC4A6NH21 518 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SMTNL1A8MU46 457 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 LDLRAD4O15165 306 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 F9P00740 461 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 MMP2P08253 660 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SSTR2P30874 369 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 HNRNPH1P31943 449 aaKnown RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 GABRB2P47870 512 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 COMPP49747 757 aaPredicted RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 ECT2LQ008S8 904 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 COASYQ13057 564 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 EFNB3Q15768 340 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SGO1Q5FBB7 561 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 FAM69AQ5T7M9 428 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 RHBDF2Q6PJF5 856 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 TDRPQ86YL5 185 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 ZCCHC9Q8N567 271 aaKnown RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 AGBL3Q8NEM8 1001 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 BEST2Q8NFU1 509 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 LILRB1Q8NHL6 650 aaPredicted RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 NFKBIDQ8NI38 313 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 MTBPQ96DY7 904 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SCMH1Q96GD3 660 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 ADGRG7Q96K78 797 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 ZNF570Q96NI8 536 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 DUX5Q96PT3 197 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 GLIS2Q9BZE0 524 aaPredicted RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 PAIP1Q9H074 479 aaKnown RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 PLEKHA4Q9H4M7 779 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 GAREM1Q9H706 876 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 DDX31Q9H8H2 851 aaKnown RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 MAGEE1Q9HCI5 957 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 BPIFA1Q9NP55 256 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SLC9A2Q9UBY0 812 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 SLCO3A1Q9UIG8 710 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 ARHGAP26Q9UNA1 814 aa3.8□□□□□ -1.8
KDM3A-208ENST00000463013 LSM4Q9Y4Z0 139 aaKnown RBP3.8□□□□□ -1.8
KDM3A-208ENST00000463013 A0A1B0GUV1 79 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 A0A1B0GVC2 190 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 DENND3A2RUS2 1198 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 A6NLC8 198 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 IFNL4K9M1U5 179 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 NPHP1O15259 732 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SLC16A5O15375 505 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 TNFSF14O43557 240 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 ABCD1P33897 745 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SHMT1P34896 483 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 FOXD4Q12950 439 aaPredicted RBP3.79□□□□□ -1.8
KDM3A-208ENST00000463013 DLG1Q12959 904 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SF3B4Q15427 424 aaKnown RBP eCLIP3.79□□□□□ -1.81e-8■■■■■ 36.6
KDM3A-208ENST00000463013 CALCRLQ16602 461 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 AMZ1Q400G9 498 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 LCTLQ6UWM7 567 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 B3GNT6Q6ZMB0 384 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 MTSS1LQ765P7 747 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 LINGO2Q7L985 606 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SLC46A3Q7Z3Q1 461 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SLC35F3Q8IY50 421 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 TSPYL6Q8N831 410 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 CREB3L4Q8TEY5 395 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 IGSF21Q96ID5 467 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 OR1F2PQ96R84 312 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 AGXT2Q9BYV1 514 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SLC25A18Q9H1K4 315 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 ESRP2Q9H6T0 727 aaKnown RBP3.79□□□□□ -1.8
KDM3A-208ENST00000463013 MKKSQ9NPJ1 570 aaPredicted RBP3.79□□□□□ -1.8
KDM3A-208ENST00000463013 TXLNGQ9NUQ3 528 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 C9orf78Q9NZ63 289 aaPredicted RBP3.79□□□□□ -1.8
KDM3A-208ENST00000463013 STON1Q9Y6Q2 735 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 SCINQ9Y6U3 715 aa3.79□□□□□ -1.8
KDM3A-208ENST00000463013 ATXN2Q99700 1313 aaKnown RBP3.78□□□□□ -1.8
KDM3A-208ENST00000463013 TTC36A6NLP5 189 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms