RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 K7ENP7 123 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 ZW10O43264 779 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 BUB1BO60566 1050 aaPredicted RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 RECQL5O94762 991 aaPredicted RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 ZNF135P52742 658 aaPredicted RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 KIAA1024LP59773 190 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 AP1S1P61966 158 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 SKOR1P84550 965 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 ARHGEF7Q14155 803 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 PPP6R3Q5H9R7 873 aaPredicted RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 INO80CQ6PI98 192 aaPredicted RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 RFX8Q6ZV50 586 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 CCNJLQ8IV13 435 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 TSEN2Q8NCE0 465 aaKnown RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 SNRNP27Q8WVK2 155 aaKnown RBP15.47■□□□□ 0.07
SKA3-204ENST00000462482 GBP4Q96PP9 640 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.47■□□□□ 0.07
SKA3-204ENST00000462482 LRRN3Q9H3W5 708 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 WDR26Q9H7D7 661 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 SEPT3Q9UH03 358 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 PCDHGA7Q9Y5G6 932 aa15.47■□□□□ 0.07
SKA3-204ENST00000462482 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 A0A1W2PQ67 120 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 LRRC10BA6NIK2 292 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 TMCO5BA8MYB1 307 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 TNFRSF10CO14798 259 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 ZIC2O95409 532 aaPredicted RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 PRKCGP05129 697 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 GLB1P16278 677 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 UGT1A5P35504 534 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 SCNN1BP51168 640 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 PDX1P52945 283 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 IL10RBQ08334 325 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 NSUN2Q08J23 767 aaKnown RBP eCLIP15.46■□□□□ 0.07
SKA3-204ENST00000462482 CLN3Q13286 438 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 BIRC2Q13490 618 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 MAMLD1Q13495 774 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 ZNF235Q14590 738 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 ACOX1Q15067 660 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 PCSK4Q6UW60 755 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 RBM43Q6ZSC3 357 aaKnown RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 PSTKQ8IV42 348 aaKnown RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 BBS5Q8N3I7 341 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 LZTR1Q8N653 840 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 Q8N9G6 341 aaPredicted RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 KIAA1524Q8TCG1 905 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 TMEM159Q96B96 161 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 PDXPQ96GD0 296 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 FOXP3Q9BZS1 431 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 NAT10Q9H0A0 1025 aaKnown RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 DPEP2Q9H4A9 486 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 KCTD5Q9NXV2 234 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 AKAP7Q9P0M2 348 aaPredicted RBP15.46■□□□□ 0.07
SKA3-204ENST00000462482 MYO6Q9UM54 1294 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 TRPM6Q9BX84 2022 aa15.46■□□□□ 0.07
SKA3-204ENST00000462482 B4DGG1 531 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 TEX33O43247 280 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 HOXC4P09017 264 aaPredicted RBP15.45■□□□□ 0.06
SKA3-204ENST00000462482 PNLIPP16233 465 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 ERCC2P18074 760 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 SLC5A2P31639 672 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 CCKBRP32239 447 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 OGDHQ02218 1023 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 LY6DQ14210 128 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 ASIC2Q16515 512 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 C14orf28Q4W4Y0 310 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 TMCO4Q5TGY1 634 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 LIPIQ6XZB0 460 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 CLEC17AQ6ZS10 378 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 DPPA4Q7L190 304 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 B3GNT8Q7Z7M8 397 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 PLA2G15Q8NCC3 412 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 GPR156Q8NFN8 814 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 NSMCE1Q8WV22 266 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 OR1E3Q8WZA6 343 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 FUBP1Q96AE4 644 aaKnown RBP15.45■□□□□ 0.06
SKA3-204ENST00000462482 MED8Q96G25 268 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 ZNF599Q96NL3 588 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 CMKLR1Q99788 373 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 SNRNP25Q9BV90 132 aaKnown RBP15.45■□□□□ 0.06
SKA3-204ENST00000462482 ZWILCHQ9H900 591 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 CYP4F12Q9HCS2 524 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 SEPT10Q9P0V9 454 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 PISDQ9UG56 409 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 RABGEF1Q9UJ41 708 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 APPL1Q9UKG1 709 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 ATXN7L1Q9ULK2 861 aaPredicted RBP15.45■□□□□ 0.06
SKA3-204ENST00000462482 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 SCINQ9Y6U3 715 aa15.45■□□□□ 0.06
SKA3-204ENST00000462482 GCN1Q92616 2671 aaKnown RBP15.45■□□□□ 0.06
SKA3-204ENST00000462482 PTPRQQ9UMZ3 2332 aa15.44■□□□□ 0.06
SKA3-204ENST00000462482 PMS2P1A4D2B8 440 aa15.44■□□□□ 0.06
SKA3-204ENST00000462482 TMEM202A6NGA9 273 aa15.44■□□□□ 0.06
SKA3-204ENST00000462482 HSPA9P38646 679 aaKnown RBP15.44■□□□□ 0.06
SKA3-204ENST00000462482 ANP32AP39687 249 aaKnown RBP15.44■□□□□ 0.06
SKA3-204ENST00000462482 ARL4AP40617 200 aa15.44■□□□□ 0.06
SKA3-204ENST00000462482 RGRP47804 291 aa15.44■□□□□ 0.06
SKA3-204ENST00000462482 HCAR3P49019 387 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms