RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SERPINB6P35237 376 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 BLKP51451 505 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 HK3P52790 923 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 CDH6P55285 790 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 MTM1Q13496 603 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 KRT81Q14533 505 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 NR0B2Q15466 257 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 HADHQ16836 314 aaKnown RBP19.04■□□□□ 0.64
VARS-220ENST00000461874 ALG11Q2TAA5 492 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 COL28A1Q2UY09 1125 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 GUSBP11Q6P575 273 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 ENPP7Q6UWV6 458 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 HID1Q8IV36 788 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 ATPAF2Q8N5M1 289 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 PAF1Q8N7H5 531 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 ZNF564Q8TBZ8 553 aaPredicted RBP19.04■□□□□ 0.64
VARS-220ENST00000461874 MAPK15Q8TD08 544 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 TSACCQ96A04 125 aaPredicted RBP19.04■□□□□ 0.64
VARS-220ENST00000461874 NUDCD1Q96RS6 583 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 MGME1Q9BQP7 344 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 PCDHGC4Q9Y5F7 938 aa19.04■□□□□ 0.64
VARS-220ENST00000461874 A0A1W2PQ67 120 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 CD48P09326 243 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 ELFN1P0C7U0 828 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 SSR1P43307 286 aaKnown RBP19.03■□□□□ 0.64
VARS-220ENST00000461874 ARSEP51690 589 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 MMRN1Q13201 1228 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 SKOR2Q2VWA4 1001 aaPredicted RBP19.03■□□□□ 0.64
VARS-220ENST00000461874 C6orf132Q5T0Z8 1188 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 EFL1Q7Z2Z2 1120 aaKnown RBP19.03■□□□□ 0.64
VARS-220ENST00000461874 SLC35F3Q8IY50 421 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 BBS5Q8N3I7 341 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 FSTL5Q8N475 847 aaPredicted RBP19.03■□□□□ 0.64
VARS-220ENST00000461874 PLA2G15Q8NCC3 412 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 ATL2Q8NHH9 583 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 GLMNQ92990 594 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 DEPDC7Q96QD5 511 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 NOD2Q9HC29 1040 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 PCDHB1Q9Y5F3 818 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 MYLKQ15746 1914 aa19.03■□□□□ 0.64
VARS-220ENST00000461874 A8MX80 341 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 TLX3O43711 291 aaPredicted RBP19.02■□□□□ 0.64
VARS-220ENST00000461874 SOCS5O75159 536 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 PROSCO94903 275 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 RASGRP1O95267 797 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 CELA2BP08218 269 aaPredicted RBP19.02■□□□□ 0.64
VARS-220ENST00000461874 GM2AP17900 193 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 RPIAP49247 311 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 SRP54P61011 504 aaKnown RBP19.02■□□□□ 0.64
VARS-220ENST00000461874 ELOCQ15369 112 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 RALGPS1Q5JS13 557 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 MARC1Q5VT66 337 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 LRRC49Q8IUZ0 686 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 NSMCE1Q8WV22 266 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 WDR92Q96MX6 357 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 CTTNBP2NLQ9P2B4 639 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 UVRAGQ9P2Y5 699 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 B4GALT6Q9UBX8 382 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 KLQ9UEF7 1012 aa19.02■□□□□ 0.64
VARS-220ENST00000461874 BRINP1O60477 761 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 CSO75390 466 aaKnown RBP19.01■□□□□ 0.63
VARS-220ENST00000461874 ALPIP09923 528 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 H2AFZP0C0S5 128 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 CTSEP14091 401 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 TGM2P21980 687 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 MMP13P45452 471 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 KIAA1024LP59773 190 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 MAXP61244 160 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 DPYSL3Q14195 570 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 SLC18A3Q16572 532 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 ASTE1Q2TB18 679 aaPredicted RBP19.01■□□□□ 0.63
VARS-220ENST00000461874 ATP13A4Q4VNC1 1196 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 SPECC1LQ69YQ0 1117 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 LVRNQ6Q4G3 990 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 NYAP1Q6ZVC0 841 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 H2AFVQ71UI9 128 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 RD3Q7Z3Z2 195 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 CPNE8Q86YQ8 564 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 SDR16C5Q8N3Y7 309 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 OR8K1Q8NGG5 319 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 TPCN2Q8NHX9 752 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 PDCD6IPQ8WUM4 868 aaKnown RBP19.01■□□□□ 0.63
VARS-220ENST00000461874 FUBP1Q96AE4 644 aaKnown RBP19.01■□□□□ 0.63
VARS-220ENST00000461874 COQ10AQ96MF6 247 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 DCBLD2Q96PD2 775 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 DNAJC7Q99615 494 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 PACSIN1Q9BY11 444 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 DGKBQ9Y6T7 804 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 NBEAQ8NFP9 2946 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 ADAMTS20P59510 1910 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 LRRK1Q38SD2 2015 aa19.01■□□□□ 0.63
VARS-220ENST00000461874 CBFA2T2O43439 604 aa19■□□□□ 0.63
VARS-220ENST00000461874 CPP00450 1065 aa19■□□□□ 0.63
VARS-220ENST00000461874 HOXC4P09017 264 aaPredicted RBP19■□□□□ 0.63
VARS-220ENST00000461874 TRIM23P36406 574 aa19■□□□□ 0.63
VARS-220ENST00000461874 EIF2S3P41091 472 aaKnown RBP19■□□□□ 0.63
VARS-220ENST00000461874 TRAF2Q12933 501 aa19■□□□□ 0.63
VARS-220ENST00000461874 TRIM14Q14142 442 aa19■□□□□ 0.63
VARS-220ENST00000461874 ACOX1Q15067 660 aa19■□□□□ 0.63
VARS-220ENST00000461874 PERM1Q5SV97 790 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms