RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 PEX6Q13608 980 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 INPP5AQ14642 412 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 TPD52L1Q16890 204 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 C2CD6Q53TS8 623 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 MANEAQ5SRI9 462 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 TMEM164Q5U3C3 297 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 TAF3Q5VWG9 929 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 SLFN11Q7Z7L1 901 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 PHF13Q86YI8 300 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 JAMLQ86YT9 394 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 GPBAR1Q8TDU6 330 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 CPA5Q8WXQ8 436 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 DPYSL5Q9BPU6 564 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 ARHGAP9Q9BRR9 750 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 GANQ9H2C0 597 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 SUV39H2Q9H5I1 410 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 LRRC19Q9H756 370 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 ATP13A3Q9H7F0 1226 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 FGF22Q9HCT0 170 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 AKAP7Q9P0M2 348 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 SIRPGQ9P1W8 387 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 GULP1Q9UBP9 304 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 UBA2Q9UBT2 640 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 PISDQ9UG56 409 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 PCDHB11Q9Y5F2 797 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 NBASA2RRP1 2371 aa14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 USP9XQ93008 2570 aaPredicted RBP14.64□□□□□ -0.07
DNMT3A-207ENST00000461228 PRAMEF33A0A0G2JMD5 474 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 A0A1W2PQ67 120 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 C9orf172C9J069 976 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 RASA4BC9J798 803 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 CASC3O15234 703 aaKnown RBP14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 RASA4O43374 803 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 PRAMEF10O60809 474 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 PRAMEF11O60813 436 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 KRT3P12035 628 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 GPR3P46089 330 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 NSFP46459 744 aaKnown RBP14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 LIG3P49916 1009 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 ZNF143P52747 638 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 RALGDSQ12967 914 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 SQSTM1Q13501 440 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 RFTN1Q14699 578 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 CFAP58Q5T655 872 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 AFMIDQ63HM1 303 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 ENPP7Q6UWV6 458 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 ZNF574Q6ZN55 896 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 JOSD2Q8TAC2 188 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 GPT2Q8TD30 523 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 TSACCQ96A04 125 aaPredicted RBP14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 C11orf70Q9BRQ4 267 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 DDA1Q9BW61 102 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 WDR26Q9H7D7 661 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 OR1A2Q9Y585 309 aa14.63□□□□□ -0.07
DNMT3A-207ENST00000461228 TCRBV5S1A1TA0A578 114 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 PIGNO95427 931 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 MYCLP1P12525 358 aaPredicted RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 DESP17661 470 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 GPD1P21695 349 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 RFC1P35251 1148 aaPredicted RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 ZNF135P52742 658 aaPredicted RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 AP1S1P61966 158 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 POLR2LP62875 67 aaKnown RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 SRSF1Q07955 248 aaKnown RBP eCLIP14.62□□□□□ -0.072e-8■■■■□ 25.9
DNMT3A-207ENST00000461228 NSUN2Q08J23 767 aaKnown RBP eCLIP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 MAP9Q49MG5 647 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 SPECC1LQ69YQ0 1117 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 DPPA4Q7L190 304 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 MON1BQ7L1V2 547 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 CCDC112Q8NEF3 446 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 OR1E3Q8WZA6 343 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 EXTL1Q92935 676 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 FUBP1Q96AE4 644 aaKnown RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 CDH19Q9H159 772 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 SLC25A18Q9H1K4 315 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 TRNAU1APQ9NX07 287 aaKnown RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 FOXJ2Q9P0K8 574 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 RNF215Q9Y6U7 377 aa14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 SPTBN1Q01082 2364 aaKnown RBP14.62□□□□□ -0.07
DNMT3A-207ENST00000461228 PRSS38A1L453 326 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 ANKRD62A6NC57 917 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 SIGLEC16A6NMB1 481 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 PSMD11O00231 422 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 CAPN5O15484 640 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 SOCS5O75159 536 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 GADD45BO75293 160 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 NTRK1P04629 796 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 PCCBP05166 539 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 ELFN1P0C7U0 828 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 HGFP14210 728 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 ITIH1P19827 911 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 NFKBIAP25963 317 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 SOX5P35711 763 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 ATP1A2P50993 1020 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 TGIF1Q15583 401 aa14.61□□□□□ -0.07
DNMT3A-207ENST00000461228 RAB6CQ53S08 254 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms