RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RCBTB1Q8NDN9 531 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 APOBEC4Q8WW27 367 aaKnown RBP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 NT5C3BQ969T7 300 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 ABHD17AQ96GS6 310 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 TBCBQ99426 244 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 EFHD1Q9BUP0 239 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 DDA1Q9BW61 102 aa17.34■□□□□ 0.37
TOP3A-202ENST00000461127 PPARGC1AQ9UBK2 798 aaKnown RBP17.34■□□□□ 0.37
TOP3A-202ENST00000461127 RHPN2P1A8MT19 583 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 CACNB4O00305 520 aaPredicted RBP17.33■□□□□ 0.36
TOP3A-202ENST00000461127 B4GAT1O43505 415 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 RAD1O60671 282 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 AGFG2O95081 481 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 IGSF6O95976 241 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 PCCBP05166 539 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 TIMP2P16035 220 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 ITIH2P19823 946 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 KELP23276 732 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 CSTF2P33240 577 aaKnown RBP eCLIP17.33■□□□□ 0.36
TOP3A-202ENST00000461127 KRT9P35527 623 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 OR1D5P58170 312 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 FOXR2Q6PJQ5 311 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 OR56A4Q8NGH8 313 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 ART4Q93070 314 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 CCDC74BQ96LY2 380 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 GPN2Q9H9Y4 310 aaPredicted RBP17.33■□□□□ 0.36
TOP3A-202ENST00000461127 KCNK4Q9NYG8 393 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.33■□□□□ 0.36
TOP3A-202ENST00000461127 B3GALT1Q9Y5Z6 326 aa17.33■□□□□ 0.36
TOP3A-202ENST00000461127 ARHGEF17Q96PE2 2063 aaPredicted RBP17.33■□□□□ 0.36
TOP3A-202ENST00000461127 IGHV5-10-1A0A0J9YXX1 117 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 ZSCAN5CA6NGD5 496 aaPredicted RBP17.32■□□□□ 0.36
TOP3A-202ENST00000461127 PRR19A6NJB7 356 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 NKX2-8O15522 239 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 MTSS1O43312 755 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 PRKAR1AP10644 381 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 MAPKAPK2P49137 400 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 ARSDP51689 593 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 MC1RQ01726 317 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 PTK2Q05397 1052 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 CDC20Q12834 499 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 PTPN20Q4JDL3 420 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 OR1E3Q8WZA6 343 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 NUDT22Q9BRQ3 303 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 TMEM168Q9H0V1 697 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 MAGEH1Q9H213 219 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 FANCLQ9NW38 375 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 SLC39A1Q9NY26 324 aa17.32■□□□□ 0.36
TOP3A-202ENST00000461127 TNFRSF10CO14798 259 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 GNA14O95837 355 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 CDK11BP21127 795 aaKnown RBP17.31■□□□□ 0.36
TOP3A-202ENST00000461127 RAB15P59190 212 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 KIAA1024LP59773 190 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 AGERQ15109 404 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 TSR1Q2NL82 804 aaKnown RBP17.31■□□□□ 0.36
TOP3A-202ENST00000461127 DCAF12Q5T6F0 453 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 FHL5Q5TD97 284 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 RWDD4Q6NW29 188 aaKnown RBP17.31■□□□□ 0.36
TOP3A-202ENST00000461127 ERAP2Q6P179 960 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 LEKR1Q6ZMV7 388 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 NYAP1Q6ZVC0 841 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 ZNF354CQ86Y25 554 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 SFTPA2Q8IWL1 248 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 TRIM59Q8IWR1 403 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 TEX19Q8NA77 164 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 CASKIN2Q8WXE0 1202 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 PMEPA1Q969W9 287 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 VOPP1Q96AW1 172 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 NCAPGQ9BPX3 1015 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 MOSPD1Q9UJG1 213 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 MFHAS1Q9Y4C4 1052 aa17.31■□□□□ 0.36
TOP3A-202ENST00000461127 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 ITPR2Q14571 2701 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 BUB1O43683 1085 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 RAMP2O60895 175 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 VPS4BO75351 444 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 TMCC1O94876 653 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 MAP4P27816 1152 aaKnown RBP17.3■□□□□ 0.36
TOP3A-202ENST00000461127 GPR3P46089 330 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 LIMK2P53671 638 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 RHOAP61586 193 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 DEFB109BQ30KR1 87 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 ARTNQ5T4W7 220 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 CFAP58Q5T655 872 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
TOP3A-202ENST00000461127 KCTD16Q68DU8 428 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 ZNF438Q7Z4V0 828 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 FAM131BQ86XD5 332 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 NRSN1Q8IZ57 195 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 NLGN4XQ8N0W4 816 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 ANKRD20A12PQ8NF67 263 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 NLGN4YQ8NFZ3 816 aaPredicted RBP17.3■□□□□ 0.36
TOP3A-202ENST00000461127 OR4D9Q8NGE8 314 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 HCAR2Q8TDS4 363 aa17.3■□□□□ 0.36
TOP3A-202ENST00000461127 TEFMQ96QE5 360 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms