RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 GTF3C6Q969F1 213 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 ZC3HAV1LQ96H79 300 aaKnown RBP3.52□□□□□ -1.85
RFC4-211ENST00000460408 WDFY2Q96P53 400 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 SIN3AQ96ST3 1273 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 ISCUQ9H1K1 167 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 GHITMQ9H3K2 345 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 MAGEE1Q9HCI5 957 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 FBRSL1Q9HCM7 1045 aaKnown RBP3.52□□□□□ -1.85
RFC4-211ENST00000460408 SEPT11Q9NVA2 429 aaKnown RBP3.52□□□□□ -1.85
RFC4-211ENST00000460408 HCFC1R1Q9NWW0 138 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 TERF2IPQ9NYB0 399 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 SWAP70Q9UH65 585 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 HAO1Q9UJM8 370 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 FBXO2Q9UK22 296 aaPredicted RBP3.52□□□□□ -1.85
RFC4-211ENST00000460408 CORO1CQ9ULV4 474 aaPredicted RBP3.52□□□□□ -1.85
RFC4-211ENST00000460408 NFE2L3Q9Y4A8 694 aa3.52□□□□□ -1.85
RFC4-211ENST00000460408 UTYO14607 1347 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 TYW5A2RUC4 315 aaKnown RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 FAM90A8PA6NJQ4 464 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 AGAP14A8MT82 685 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 A8MZ25 164 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 CHL1O00533 1208 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 BCAT2O15382 392 aaPredicted RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 GFPT2O94808 682 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 OR2C1O95371 312 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 TOMM40O96008 361 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LCATP04180 440 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LDHCP07864 332 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 TMEM191BP0C7N4 346 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 FAM90A13PP0C7W8 464 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 FAM90A24PP0C7X0 464 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 ARSBP15848 533 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 MYF6P23409 242 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 CHATP28329 748 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 HADHAP40939 763 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 COMPP49747 757 aaPredicted RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 P2RX3P56373 397 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LINC00205P59089 165 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 ZP1P60852 638 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 FOXD4Q12950 439 aaPredicted RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 PTGR1Q14914 329 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 COL28A1Q2UY09 1125 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LEXMQ3ZCV2 418 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 WASHC2DQ5SRD0 308 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 DCAF12L2Q5VW00 463 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 ITPRIPL1Q6GPH6 555 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 CES5AQ6NT32 575 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 FBXO46Q6PJ61 603 aaPredicted RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 TSSK4Q6SA08 328 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LCTLQ6UWM7 567 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 DLK2Q6UY11 383 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 CTU1Q7Z7A3 348 aaKnown RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 WDTC1Q8N5D0 677 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 C7orf57Q8NEG2 295 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LPAR1Q92633 364 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 SMARCE1Q969G3 411 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 SLC25A28Q96A46 364 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 FBXL8Q96CD0 374 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 VCPIP1Q96JH7 1222 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 PPP1R13BQ96KQ4 1090 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 APOLD1Q96LR9 279 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 NLRP4Q96MN2 994 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 SLITRK1Q96PX8 696 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 C1QTNF5Q9BXJ0 243 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 FOXP1Q9H334 677 aaPredicted RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 CLK4Q9HAZ1 481 aaKnown RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 PLAC1Q9HBJ0 212 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 KRCC1Q9NPI7 259 aaPredicted RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 CYSLTR2Q9NS75 346 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 WWOXQ9NZC7 414 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 EHD2Q9NZN4 543 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 TBC1D29Q9UFV1 150 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 GPR34Q9UPC5 381 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 LAS1LQ9Y4W2 734 aaKnown RBP3.51□□□□□ -1.85
RFC4-211ENST00000460408 LYVE1Q9Y5Y7 322 aa3.51□□□□□ -1.85
RFC4-211ENST00000460408 A6NCN8 305 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 MYMKA6NI61 221 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 BECN2A8MW95 431 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 H0YGN5 161 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 GTPBP1O00178 669 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 TIPRLO75663 272 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 RGS11O94810 467 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 PSG1P11464 419 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 NFKBIAP25963 317 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 UBA7P41226 1012 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 RFX2P48378 723 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 CLNS1AP54105 237 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 NAP1L1P55209 391 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 NIPAL4Q0D2K0 466 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ST3GAL1Q11201 340 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 FRG1Q14331 258 aaKnown RBP3.5□□□□□ -1.85
RFC4-211ENST00000460408 HNF4GQ14541 408 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ARHGEF6Q15052 776 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 PRTGQ2VWP7 1150 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 PLEKHA7Q6IQ23 1121 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ANKRD54Q6NXT1 300 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 KLHL24Q6TFL4 600 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 LINGO2Q7L985 606 aa3.5□□□□□ -1.85
RFC4-211ENST00000460408 ZNF367Q7RTV3 350 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms