RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SH2D5Q6ZV89 423 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 NT5C3BQ969T7 300 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 POMKQ9H5K3 350 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 FAM50BQ9Y247 325 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 KCTD3Q9Y597 815 aa15.5■□□□□ 0.07
LMNB1-203ENST00000460265 KCNU1A8MYU2 1149 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 SLC2A3P11169 496 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 CCNCP24863 283 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 STT3AP46977 705 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 KIF19Q2TAC6 998 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 PRSS55Q6UWB4 352 aaPredicted RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 AFAP1L2Q8N4X5 818 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 METTL25Q8N6Q8 603 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 CD99L2Q8TCZ2 262 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 OR52B2Q96RD2 323 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 ZYG11BQ9C0D3 744 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 PLGRKTQ9HBL7 147 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 CDYLQ9Y232 598 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 AP3B1O00203 1094 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 TLR5O60602 858 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 HAPLN1P10915 354 aaPredicted RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 CYBAP13498 195 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 SLC1A2P43004 574 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 RXRGP48443 463 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 TWF1Q12792 350 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 CYTH1Q15438 398 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 NAPRTQ6XQN6 538 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 TMEM135Q86UB9 458 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 HPS6Q86YV9 775 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 ALG9Q9H6U8 611 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 ZDHHC7Q9NXF8 308 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 ARHGAP26Q9UNA1 814 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 KLF11O14901 512 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 GIPC1O14908 333 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 FGF10O15520 208 aaPredicted RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 RAG1P15918 1043 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 TFEBP19484 476 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 RAB10P61026 200 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 BRMS1LQ5PSV4 323 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 FBXL19Q6PCT2 694 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 AAGABQ6PD74 315 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 DDIASQ8IXT1 998 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 SUSD3Q96L08 255 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 LENG8Q96PV6 779 aaPredicted RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 MUC3BQ9H195 1237 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 FAM96AQ9H5X1 160 aa15.49■□□□□ 0.07
LMNB1-203ENST00000460265 TLR8Q9NR97 1041 aaKnown RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 UTP6Q9NYH9 597 aaKnown RBP15.49■□□□□ 0.07
LMNB1-203ENST00000460265 MATN2O00339 956 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 COL6A2P12110 1019 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 CKBP12277 381 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 ENTPD1P49961 510 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 RPL14P50914 215 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 MLLT6P55198 1093 aaPredicted RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 RBM20Q5T481 1227 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 SCD5Q86SK9 330 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 TBATAQ96M53 351 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 CCSER2Q9H7U1 834 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 PCDH10Q9P2E7 1040 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 SH3PXD2BA1X283 911 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 ALDH1A2O94788 518 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 SORBS2O94875 1100 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 ALDH7A1P49419 539 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 KPNA2P52292 529 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 C6orf183Q5T699 404 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 TAS2R42Q7RTR8 314 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 ZC3HC1Q86WB0 502 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 RIN3Q8TB24 985 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 MRPS26Q9BYN8 205 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 NSMCE4AQ9NXX6 385 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 NCKIPSDQ9NZQ3 722 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 F5H5T6 163 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 TNFAIP8O95379 198 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 EIF2B2P49770 351 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 KCNQ1P51787 676 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 NAB1Q13506 487 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 TLR1Q15399 786 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 STEAP4Q687X5 459 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 DENND1CQ8IV53 801 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 DDI1Q8WTU0 396 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 SCLYQ96I15 445 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 CDRT15Q96T59 188 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 PAIP1Q9H074 479 aaKnown RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 TBC1D23Q9NUY8 699 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 TUBA8Q9NY65 449 aaPredicted RBP15.48■□□□□ 0.07
LMNB1-203ENST00000460265 FADS3Q9Y5Q0 445 aa15.48■□□□□ 0.07
LMNB1-203ENST00000460265 A8MX80 341 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 HHLA1C9JL84 531 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 OCM2P0CE71 109 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 OCMP0CE72 109 aaPredicted RBP15.47■□□□□ 0.07
LMNB1-203ENST00000460265 HOXD10P28358 340 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 ACVRL1P37023 503 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 HCAR3P49019 387 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 HARS2P49590 506 aaKnown RBP15.47■□□□□ 0.07
LMNB1-203ENST00000460265 PDAP1Q13442 181 aaKnown RBP15.47■□□□□ 0.07
LMNB1-203ENST00000460265 FBXL22Q6P050 247 aa15.47■□□□□ 0.07
LMNB1-203ENST00000460265 RTL3Q8N8U3 475 aaKnown RBP15.47■□□□□ 0.07
LMNB1-203ENST00000460265 ERLEC1Q96DZ1 483 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms