RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	MS4A14	Q96JA4	679 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	FEM1C	Q96JP0	617 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	MLPH	Q9BV36	600 aa	Predicted RBP	10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	EDEM2	Q9BV94	578 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	SLC17A9	Q9BYT1	436 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	UBP1	Q9NZI7	540 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	DMTF1	Q9Y222	760 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783	SNX11	Q9Y5W9	270 aa		10.31	□□□□□ -0.76
MRPL55-223	ENST00000459783		A0A0J9YYE9	177 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	GOLGA8CP	A6NN73	597 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	NEMP1	O14524	444 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ARHGAP33	O14559	1287 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	VILL	O15195	856 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	KCNN4	O15554	427 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	MTSS1	O43312	755 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CEP104	O60308	925 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PMPCB	O75439	489 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	NEBL	O76041	1014 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	HEXIM1	O94992	359 aa	Known RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	TRBC1	P01850	177 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	FGG	P02679	453 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ATXN1L	P0C7T5	689 aa	Known RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	HNRNPA2B1	P22626	353 aa	Known RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CES1	P23141	567 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	VIPR1	P32241	457 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	HNF1B	P35680	557 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CETN2	P41208	172 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	DPP6	P42658	865 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CTSK	P43235	329 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CHRNA4	P43681	627 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SUOX	P51687	545 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	AFF3	P51826	1226 aa	Known RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	WNT3A	P56704	352 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ELP6	Q0PNE2	266 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	OLIG2	Q13516	323 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	GALNT3	Q14435	633 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SHB	Q15464	509 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SLC14A2	Q15849	920 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PCSK7	Q16549	785 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	WSCD2	Q2TBF2	565 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ANKRD20A2	Q5SQ80	823 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PRAMEF14	Q5SWL7	426 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CFAP58	Q5T655	872 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ANKRD20A1	Q5TYW2	823 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ANKRD20A3	Q5VUR7	823 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CRTC1	Q6UUV9	634 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PID1	Q7Z2X4	250 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	KDELC2	Q7Z4H8	507 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	HSD11B1L	Q7Z5J1	315 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ABI3BP	Q7Z7G0	1075 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	KLHDC8B	Q8IXV7	354 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SLC22A18AS	Q8N1D0	253 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	RASGEF1C	Q8N431	466 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	FAM71D	Q8N9W8	422 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PLA2G15	Q8NCC3	412 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	LPCAT1	Q8NF37	534 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	OR13H1	Q8NG92	308 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	CEP76	Q8TAP6	659 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	UBE2Q2	Q8WVN8	375 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ASB12	Q8WXK4	309 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SCRN2	Q96FV2	425 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	MRGPRX2	Q96LB1	330 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	COQ10A	Q96MF6	247 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SPATA13	Q96N96	652 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	FCRL5	Q96RD9	977 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	VAT1	Q99536	393 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	TMEM121	Q9BTD3	319 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	GBA3	Q9H227	469 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PCDH9	Q9HC56	1237 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	AASDHPPT	Q9NRN7	309 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	GPR27	Q9NS67	375 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SUSD2	Q9UGT4	822 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	PHTF1	Q9UMS5	762 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ANKRD6	Q9Y2G4	727 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	JRKL	Q9Y4A0	524 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	SPO11	Q9Y5K1	396 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	ANKRD36	A6QL64	1941 aa		10.3	□□□□□ -0.76
MRPL55-223	ENST00000459783	GOLGA6L9	A6NEM1	432 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	CAPN8	A6NHC0	703 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	PRAMEF26	H0Y7S4	382 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783		K7ESM1	405 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	TM4SF5	O14894	197 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	ZNF185	O15231	689 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	TM7SF2	O76062	418 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	RECQL5	O94762	991 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	METTL18	O95568	372 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	C1S	P09871	688 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	PIRT	P0C851	137 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	ETS1	P14921	441 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	GNS	P15586	552 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	XPA	P23025	273 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	PSMB4	P28070	264 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	CD38	P28907	300 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	ADRA1A	P35348	466 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	NUDT1	P36639	197 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	NXPH1	P58417	271 aa		10.29	□□□□□ -0.76
MRPL55-223	ENST00000459783	LMNB2	Q03252	620 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms