RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MYO19Q96H55 970 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 C9orf72Q96LT7 481 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 PSKH2Q96QS6 385 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 FMO2Q99518 471 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 FERMT1Q9BQL6 677 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 LRRC4CQ9HCJ2 640 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 POLR3BQ9NW08 1133 aaPredicted RBP10.42□□□□□ -0.74
USP39-210ENST00000459775 LUZP4Q9P127 313 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 ERVW-1Q9UQF0 538 aa10.42□□□□□ -0.74
USP39-210ENST00000459775 FOXD2O60548 495 aaPredicted RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 POLR2EP19388 210 aaKnown RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 HPDP32754 393 aaPredicted RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 NBL1P41271 181 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 SEC13P55735 322 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 SESN2P58004 480 aaPredicted RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 RHOAP61586 193 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 SKOR1P84550 965 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 DLG2Q15700 870 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 BBS9Q3SYG4 887 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 BEND6Q5SZJ8 279 aaPredicted RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 KCTD11Q693B1 232 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 GRAMD4Q6IC98 578 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 RETSATQ6NUM9 610 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 AHI1Q8N157 1196 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 RYBPQ8N488 228 aaPredicted RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 CHST14Q8NCH0 376 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 ARMC2Q8NEN0 867 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 ANKRD7Q92527 254 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 IMP4Q96G21 291 aaKnown RBP10.41□□□□□ -0.74
USP39-210ENST00000459775 MRGPRX2Q96LB1 330 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 SERPINB12Q96P63 405 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 FCRL5Q96RD9 977 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 VAT1Q99536 393 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 MGME1Q9BQP7 344 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 FICDQ9BVA6 458 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 SEMA4AQ9H3S1 761 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 CAPN10Q9HC96 672 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 ZNF446Q9NWS9 450 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 ELOVL2Q9NXB9 296 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 SEPT3Q9UH03 358 aa10.41□□□□□ -0.74
USP39-210ENST00000459775 KDM1AO60341 852 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 KAT7O95251 611 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 PIGNO95427 931 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 PDHA1P08559 390 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 PIRTP0C851 137 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CR2P20023 1033 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 TNFRSF8P28908 595 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 WNT3AP56704 352 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SEMG2Q02383 582 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 NR1H3Q13133 447 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 GALNT3Q14435 633 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 MORF4L2Q15014 288 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 POM121L1PQ3SYA9 428 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 ITPRIPL1Q6GPH6 555 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 KDELC1Q6UW63 502 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SDCCAG8Q86SQ7 713 aaPredicted RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 UBALD2Q8IYN6 164 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 OR8H2Q8N162 312 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SH2D3CQ8N5H7 860 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.4□□□□□ -0.74
USP39-210ENST00000459775 TERB1Q8NA31 727 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CHD5Q8TDI0 1954 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CSGALNACT1Q8TDX6 532 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 ACDQ96AP0 544 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 ZNF599Q96NL3 588 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SLC2A11Q9BYW1 496 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 POLR1EQ9GZS1 481 aaKnown RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 SLC25A51Q9H1U9 297 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 VCX3BQ9H321 246 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SAYSD1Q9NPB0 183 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 TAGLN3Q9UI15 199 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 KIF26AQ9ULI4 1882 aaPredicted RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 SHISA7A6NL88 538 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SKAP2O75563 359 aaPredicted RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 AP2A1O95782 977 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SFTPCP11686 197 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 FDFT1P37268 417 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 PDIA2Q13087 525 aaKnown RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 MPP3Q13368 585 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 PON2Q15165 354 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 KYNUQ16719 465 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CCDC38Q502W7 563 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CERCAMQ5T4B2 595 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CES3Q6UWW8 571 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 TMC3Q7Z5M5 1100 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CAMK1DQ8IU85 385 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 ZCCHC9Q8N567 271 aaKnown RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 PDCD6IPQ8WUM4 868 aaKnown RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 FATE1Q969F0 183 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 FANCFQ9NPI8 374 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CACNA2D2Q9NY47 1150 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SHOC2Q9UQ13 582 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 CHKBQ9Y259 395 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 HS3ST2Q9Y278 367 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 SLC27A6Q9Y2P4 619 aa10.4□□□□□ -0.74
USP39-210ENST00000459775 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.4□□□□□ -0.74
USP39-210ENST00000459775 PIAS3Q9Y6X2 628 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms