RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SFT2D3Q587I9 215 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ALG1LQ6GMV1 187 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF280DQ6N043 979 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TXNDC11Q6PKC3 985 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CXCL17Q6UXB2 119 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ARPINQ7Z6K5 226 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SCD5Q86SK9 330 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CEP97Q8IW35 865 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SCN4BQ8IWT1 228 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 BHLHE22Q8NFJ8 381 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SPPL2BQ8TCT7 592 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 BRSK1Q8TDC3 778 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TRPC4APQ8TEL6 797 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 LENG1Q96BZ8 264 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TUBGCP5Q96RT8 1024 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ADAM2Q99965 735 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 OSBPL11Q9BXB4 747 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SPATA16Q9BXB7 569 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 NUSAP1Q9BXS6 441 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SHCBP1LQ9BZQ2 653 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CCDC68Q9H2F9 335 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TFB2MQ9H5Q4 396 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 AGO3Q9H9G7 860 aaKnown RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 NT5MQ9NPB1 228 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 RGS18Q9NS28 235 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 GID8Q9NWU2 228 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 ADA2Q9NZK5 511 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 RIMS3Q9UJD0 308 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 CROTQ9UKG9 612 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 MTF2Q9Y483 593 aaPredicted RBP8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TRAF6Q9Y4K3 522 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 SNX10Q9Y5X0 201 aa8.88□□□□□ -0.99
HDAC3-202ENST00000459727 TNRC18O15417 2968 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 GRXCR2A6NFK2 248 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MEIS3P2A8K0S8 358 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 GOLGA8TH3BQL2 631 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 H7C4K7 107 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ACOT8O14734 319 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MRASO14807 208 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 NRP2O60462 931 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 DNAJA2O60884 412 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 WISP3O95389 354 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MATN4O95460 622 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MLYCDO95822 493 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 PEX11BO96011 259 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 IGLV3-27P01718 113 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 AMHP03971 560 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SERPINF2P08697 491 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 FAM58BPP0C7Q3 252 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 IDO1P14902 403 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 PCSK2P16519 638 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 XRCC1P18887 633 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 FDXRP22570 491 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 YWHAQP27348 245 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SLC7A1P30825 629 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 CD86P42081 329 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ABCG1P45844 678 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MRPS22P82650 360 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 CREB5Q02930 508 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 DSC1Q08554 894 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 PDAP1Q13442 181 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SERINC3Q13530 473 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 INPP5AQ14642 412 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 LPIN1Q14693 890 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 POLD3Q15054 466 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SMAD1Q15797 465 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 PCSK7Q16549 785 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 USP41Q3LFD5 358 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 MS4A13Q5J8X5 152 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 NOMO2Q5JPE7 1267 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 AARS2Q5JTZ9 985 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 AP1ARQ63HQ0 302 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 LPCAT4Q643R3 524 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 REP15Q6BDI9 236 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 BORAQ6PGQ7 559 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 CNSTQ6PJW8 725 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 AFTPHQ6ULP2 937 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 UGT2A3Q6UWM9 527 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ATG14Q6ZNE5 492 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ARHGAP36Q6ZRI8 547 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 PRR23BQ6ZRT6 265 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SLC24A5Q71RS6 500 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SPATA19Q7Z5L4 167 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF598Q86UK7 904 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SPATA24Q86W54 205 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 RASAL3Q86YV0 1011 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 TICAM1Q8IUC6 712 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF683Q8IZ20 524 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ACVR1CQ8NER5 493 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 OR6P1Q8NGX9 317 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SCAMP5Q8TAC9 235 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 POP5Q969H6 163 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 ZUFSPQ96AP4 578 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 DGCR14Q96DF8 476 aaKnown RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 C19orf60Q96EN9 201 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 HMCESQ96FZ2 354 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 SPATA17Q96L03 361 aa8.87□□□□□ -0.99
HDAC3-202ENST00000459727 FAM193BQ96PV7 902 aaPredicted RBP8.87□□□□□ -0.99
HDAC3-202ENST00000459727 UHRF1Q96T88 793 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms