RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 FAM49AQ9H0Q0 323 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 C12orf65Q9H3J6 166 aaKnown RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 SCPEP1Q9HB40 452 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ACP6Q9NPH0 428 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 RWDD3Q9Y3V2 267 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PTPRJQ12913 1337 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ANK1P16157 1881 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 LINC00854A0A1B0GVQ3 168 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 C16orf96A6NNT2 1141 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 TRIM77I1YAP6 450 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 hCG_2039718K7EN88 272 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 TRDMT1O14717 391 aaKnown RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 AURKAO14965 403 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 SEPT4O43236 478 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 UGT2B11O75310 529 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ZNF254O75437 659 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 TADA2AO75478 443 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 SEC24DO94855 1032 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 IQCF3P0C7M6 154 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 RALAP11233 206 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ARF4P18085 180 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 XRCC1P18887 633 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 SSTR1P30872 391 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ETV1P50549 477 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 MRPS15P82914 257 aaKnown RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PURAQ00577 322 aaKnown RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 BEX3Q00994 111 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 IFITM3Q01628 133 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PRKCZQ05513 592 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 MERTKQ12866 999 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 DNASE1L3Q13609 305 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 TAF5Q15542 800 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 CCNYL2Q5T2Q4 361 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 RBM20Q5T481 1227 aaKnown RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 AGAP6Q5VW22 663 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 EEF1DP3Q658K8 133 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 TRIM72Q6ZMU5 477 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 FBXL6Q8N531 539 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 NKD2Q969F2 451 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 HDAC11Q96DB2 347 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 MAP6Q96JE9 813 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 AGAP4Q96P64 663 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 KLF6Q99612 283 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 MTG1Q9BT17 334 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PI4K2AQ9BTU6 479 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 CHID1Q9BWS9 393 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 APOL6Q9BWW8 343 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 TRIM15Q9C019 465 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ARHGAP39Q9C0H5 1083 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 ASB7Q9H672 318 aa11.42□□□□□ -0.58
DDX39B-214ENST00000458640 PAPSS1O43252 624 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-214ENST00000458640 NDUFA2O43678 99 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 AOC2O75106 756 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 NDST3O95803 873 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 RPLP2P05387 115 aaKnown RBP11.41□□□□□ -0.58
DDX39B-214ENST00000458640 PTPN7P35236 360 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 BLVRAP53004 296 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 WNT7BP56706 349 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 TFAMQ00059 246 aaKnown RBP11.41□□□□□ -0.58
DDX39B-214ENST00000458640 CUL2Q13617 745 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 KIZQ2M2Z5 673 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 ESCO2Q56NI9 601 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 GNASQ5JWF2 1037 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 BROXQ5VW32 411 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 FAM205BPQ63HN1 556 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 TAF2Q6P1X5 1199 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 CATSPER4Q7RTX7 472 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 ZNF677Q86XU0 584 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 SFRP1Q8N474 314 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 LEMD2Q8NC56 503 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 OR5B17Q8NGF7 314 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
DDX39B-214ENST00000458640 KAT5Q92993 513 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 ASB2Q96Q27 587 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 ADI1Q9BV57 179 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 MTMR12Q9C0I1 747 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 TRPV6Q9H1D0 765 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 UPF3AQ9H1J1 476 aaKnown RBP11.41□□□□□ -0.58
DDX39B-214ENST00000458640 RSPH9Q9H1X1 276 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-214ENST00000458640 DPEP3Q9H4B8 488 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 GABRQQ9UN88 632 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 POLHQ9Y253 713 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 RALGAPA2Q2PPJ7 1873 aa11.41□□□□□ -0.58
DDX39B-214ENST00000458640 FAM170AA1A519 330 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 OR5K4A6NMS3 321 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 PI4K2BG5E9Z4 385 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 RAD51BO15315 384 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 ABCB7O75027 752 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 VNN1O95497 513 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 ASS1P00966 412 aaKnown RBP11.4□□□□□ -0.58
DDX39B-214ENST00000458640 STAG3L1P0CL83 205 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 CXCL8P10145 99 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 CYP11B1P15538 503 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 PTPN1P18031 435 aaKnown RBP11.4□□□□□ -0.58
DDX39B-214ENST00000458640 MATN1P21941 496 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 PIK3R1P27986 724 aa11.4□□□□□ -0.58
DDX39B-214ENST00000458640 AXLP30530 894 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms