RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 SERPINA4P29622 427 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 MIPP30301 263 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 BCL2L1Q07817 233 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 IL10RBQ08334 325 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 RALGDSQ12967 914 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 MTM1Q13496 603 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 SPIDRQ14159 915 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 LIPIQ6XZB0 460 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 RFX8Q6ZV50 586 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 CYP4V2Q6ZWL3 525 aaPredicted RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 ZNF571Q7Z3V5 609 aaPredicted RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 B3GNT8Q7Z7M8 397 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 GKN2Q86XP6 184 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 TP53INP2Q8IXH6 220 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 ARL14Q8N4G2 192 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 AOPEPQ8N6M6 819 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 NPWQ8N729 165 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 KYQ8NBH2 561 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 FUBP1Q96AE4 644 aaKnown RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 CCDC74AQ96AQ1 378 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 ECHDC3Q96DC8 303 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 WDR92Q96MX6 357 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 RBM15Q96T37 977 aaKnown RBP eCLIP11.33□□□□□ -0.6
RPSA-204ENST00000458478 EIF3CQ99613 913 aaKnown RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 CINPQ9BW66 212 aaPredicted RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 SYNDIG1Q9H7V2 258 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 MRPL40Q9NQ50 206 aaKnown RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
RPSA-204ENST00000458478 KLQ9UEF7 1012 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 MYO6Q9UM54 1294 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 DGKBQ9Y6T7 804 aa11.33□□□□□ -0.6
RPSA-204ENST00000458478 CCDC187A0A096LP49 1063 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 A0A1W2PQM1 296 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 LRRC53A6NM62 1247 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 TRAFD1O14545 582 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 PRPSAP2O60256 369 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 RNF8O76064 485 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 TRIM23P36406 574 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 HCAR3P49019 387 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 SCNN1BP51168 640 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 POLR2LP62875 67 aaKnown RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 RHDQ02161 417 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 CFHR1Q03591 330 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 VAC14Q08AM6 782 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 RFTN1Q14699 578 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 TAF1BQ53T94 588 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 OGFOD3Q6PK18 319 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 CLEC14AQ86T13 490 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 SFTPA2Q8IWL1 248 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 PELI3Q8N2H9 469 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 GPR156Q8NFN8 814 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 OR56A4Q8NGH8 313 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 ATL2Q8NHH9 583 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 SNRNP27Q8WVK2 155 aaKnown RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 OR1E3Q8WZA6 343 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 CCDC97Q96F63 343 aaPredicted RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 PDXPQ96GD0 296 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 GFM1Q96RP9 751 aaKnown RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.32□□□□□ -0.6not detected■□□□□ 8.5
RPSA-204ENST00000458478 LGR4Q9BXB1 951 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 SP110Q9HB58 689 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 AIPL1Q9NZN9 384 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 CNOT8Q9UFF9 292 aaKnown RBP11.32□□□□□ -0.6
RPSA-204ENST00000458478 ANKRD36A6QL64 1941 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 LRP4O75096 1905 aa11.32□□□□□ -0.6
RPSA-204ENST00000458478 CACNB4O00305 520 aaPredicted RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 DDX3XO00571 662 aaKnown RBP eCLIP11.31□□□□□ -0.6not detected■■■□□ 19
RPSA-204ENST00000458478 LRCH4O75427 683 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 RPLP0P05388 317 aaKnown RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 ELFN1P0C7U0 828 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 GZMAP12544 262 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 TYRO3Q06418 890 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 SLC10A7Q0GE19 358 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 CLN3Q13286 438 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 DPYSQ14117 519 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 ASIC2Q16515 512 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 E4F1Q66K89 784 aaPredicted RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 PNCKQ6P2M8 343 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 DPPA4Q7L190 304 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 TAF8Q7Z7C8 310 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 ZNF605Q86T29 641 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 PSTKQ8IV42 348 aaKnown RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 FBXO39Q8N4B4 442 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 Q8N9G6 341 aaPredicted RBP11.31□□□□□ -0.6
RPSA-204ENST00000458478 FAM46DQ8NEK8 389 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 OR6C4Q8NGE1 309 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 WBP1Q96G27 269 aa11.31□□□□□ -0.6
RPSA-204ENST00000458478 LIN37Q96GY3 246 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms