RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 MOCS2O96007 188 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 F2P00734 622 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LDLRP01130 860 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC4A1P02730 911 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ALBP02768 609 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 S100BP04271 92 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CAPNS1P04632 268 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FGF1P05230 155 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HLA-DQB2P05538 268 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TFAP2AP05549 437 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HSD17B1P14061 328 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GFAPP14136 432 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HNRNPLP14866 589 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMPD1P17405 629 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CDH2P19022 906 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HLA-DPA1P20036 260 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 OGNP20774 298 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FGFR3P22607 806 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MYF6P23409 242 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOXC13P31276 330 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRIK1P39086 918 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CAPGP40121 348 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRIA3P42263 894 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCR10P46092 362 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARCN1P48444 511 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ALDH3B2P48448 385 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NDUFV1P49821 464 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CSRP3P50461 194 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC7A2P52569 658 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NDST2P52849 883 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TPD52P55327 224 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 WNT3AP56704 352 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 EEFSECP57772 596 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 USP46P62068 366 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HERVK_113P63132 956 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PITX1P78337 314 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MS4A2Q01362 244 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRG1Q02297 640 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 YWHAHQ04917 246 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RAD51Q06609 339 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SOX4Q06945 474 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TNK2Q07912 1038 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SFSWAPQ12872 951 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RALGDSQ12967 914 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CTBP1Q13363 440 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 OLIG2Q13516 323 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NFYCQ13952 458 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRP8Q14114 963 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF235Q14590 738 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC14A2Q15849 920 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PCSK7Q16549 785 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RBBP7Q16576 425 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NRF1Q16656 503 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FSCN1Q16658 493 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBED5Q49AG3 693 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PABPC1LQ4VXU2 614 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 AARS2Q5JTZ9 985 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF678Q5SXM1 525 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM182AQ5T1J6 154 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 GJC2Q5T442 439 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF618Q5T7W0 954 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM72AQ5TYM5 149 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 HECTD2Q5U5R9 776 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MARC1Q5VT66 337 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LCN8Q6JVE9 175 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM72DQ6L9T8 149 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPP4R4Q6NUP7 873 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ESRP1Q6NXG1 681 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CNSTQ6PJW8 725 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TXNDC11Q6PKC3 985 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LAYNQ6UX15 382 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP2R1Q6VVX0 501 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNF111Q6ZNA4 994 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRR23BQ6ZRT6 265 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PATL1Q86TB9 770 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF554Q86TJ5 538 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TLK2Q86UE8 772 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM72BQ86X60 149 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CILP2Q8IUL8 1156 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLVS1Q8IUQ0 354 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 SPATA2LQ8IUW3 424 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CEP97Q8IW35 865 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DENND6AQ8IWF6 608 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 TBC1D21Q8IYX1 336 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCP1BQ8IZD4 617 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LSMEM2Q8N112 164 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LILRA2Q8N149 483 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 LRRC43Q8N309 656 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF786Q8N393 782 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHCHD4Q8N4Q1 142 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 DHRSXQ8N5I4 330 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 MINDY1Q8N5J2 469 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 AADATQ8N5Z0 425 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 METTL25Q8N6Q8 603 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NPWQ8N729 165 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTGR2Q8N8N7 351 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 RTL3Q8N8U3 475 aaKnown RBP3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM47BQ8NA70 645 aa3.34□□□□□ -1.87
HMGN1P18-201ENST00000457642 NETO2Q8NC67 525 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms