RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 ENPP7Q6UWV6 458 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 CYP4V2Q6ZWL3 525 aaPredicted RBP13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 DPPA4Q7L190 304 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 SLC35F3Q8IY50 421 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 NPWQ8N729 165 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 NIPA2Q8N8Q9 360 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 NETO2Q8NC67 525 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 LSM14AQ8ND56 463 aaKnown RBP13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 CCDC97Q96F63 343 aaPredicted RBP13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 LGMNQ99538 433 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 DPH1Q9BZG8 443 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 RCOR3Q9P2K3 495 aaPredicted RBP13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 LCMT1Q9UIC8 334 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 PCDHB1Q9Y5F3 818 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 PCDHGA8Q9Y5G5 932 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 IGSF10Q6WRI0 2623 aa13.5□□□□□ -0.25
SMARCA2-216ENST00000457226 ACACAQ13085 2346 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 TK2O00142 265 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 RECQL5O94762 991 aaPredicted RBP13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 MPOP05164 745 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 PCCBP05166 539 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 TPM3P06753 285 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 SKILP12757 684 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 MYF5P13349 255 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 PTMSP20962 102 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 ZBED6P86452 979 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 C1orf61Q13536 156 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 SPIDRQ14159 915 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 ALG11Q2TAA5 492 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 SOWAHCQ53LP3 525 aaPredicted RBP13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 E4F1Q66K89 784 aaPredicted RBP13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 POLNQ7Z5Q5 900 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 NDUFAF2Q8N183 169 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 ARL14Q8N4G2 192 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 ATPAF2Q8N5M1 289 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 HSPH1Q92598 858 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 HIC2Q96JB3 615 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 CSPG4P5Q96PW8 444 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 RBM15Q96T37 977 aaKnown RBP eCLIP13.49□□□□□ -0.257e-7■■■■□ 25
SMARCA2-216ENST00000457226 CCDC3Q9BQI4 270 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 TRIM7Q9C029 511 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 CLPBQ9H078 707 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 TCEAL2Q9H3H9 227 aaPredicted RBP13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 GPR34Q9UPC5 381 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 COQ6Q9Y2Z9 468 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
SMARCA2-216ENST00000457226 LAMA5O15230 3695 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 CACNA1GO43497 2377 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 TEX51A0A1B0GUA7 166 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 MYO1FO00160 1098 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 TRAFD1O14545 582 aaPredicted RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 CYP2A6P11509 494 aaPredicted RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 ITPKBP27987 946 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 RGRP47804 291 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 UBASH3AP57075 661 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 TLE3Q04726 772 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 EIF3IQ13347 325 aaKnown RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 PEX6Q13608 980 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 COL9A2Q14055 689 aaPredicted RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 ACOX1Q15067 660 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 HADHQ16836 314 aaKnown RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 HGSNATQ68CP4 663 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 LIPIQ6XZB0 460 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 GPR155Q7Z3F1 870 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 RD3Q7Z3Z2 195 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 OR56A4Q8NGH8 313 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 PCDH19Q8TAB3 1148 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 TSACCQ96A04 125 aaPredicted RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 FCRL3Q96P31 734 aaPredicted RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 NUDCD1Q96RS6 583 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 FUCA2Q9BTY2 467 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 PRORYQ9H606 182 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 WDR26Q9H7D7 661 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 GULP1Q9UBP9 304 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 LUC7L2Q9Y383 392 aaKnown RBP13.48□□□□□ -0.25
SMARCA2-216ENST00000457226 PSMD11O00231 422 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 ZW10O43264 779 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 HTRA2O43464 458 aaPredicted RBP13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 CPP00450 1065 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 RARAP10276 462 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 HOXB3P14651 431 aaPredicted RBP13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 CES1P23141 567 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 IL1R2P27930 398 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 TRIM23P36406 574 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 MMP13P45452 471 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 TMPRSS3P57727 454 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 FANCCQ00597 558 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 CCDC173Q0VFZ6 552 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 RALGDSQ12967 914 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 KRT81Q14533 505 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 SMTNL2Q2TAL5 461 aa13.47□□□□□ -0.25
SMARCA2-216ENST00000457226 PERM1Q5SV97 790 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms