RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C10orf120Q5SQS8 335 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 FAM171A1Q5VUB5 890 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 PTAR1Q7Z6K3 402 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 ANKRD49Q8WVL7 239 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 HDAC10Q969S8 669 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 MYEOVQ96EZ4 313 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 CFHR5Q9BXR6 569 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 TLR8Q9NR97 1041 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 KCTD3Q9Y597 815 aa18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 COPG1Q9Y678 874 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-209ENST00000456560 SLC12A8A0AV02 714 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 H3BNX3 289 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 RAMP2O60895 175 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 IPO13O94829 963 aaKnown RBP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 VNN2O95498 520 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 HNRNPLP14866 589 aaKnown RBP eCLIP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 ACVR1Q04771 509 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 SULT2A1Q06520 285 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 CIR1Q86X95 450 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 RCN3Q96D15 328 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 TUBGCP5Q96RT8 1024 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 GPR62Q9BZJ7 368 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 TMEM161AQ9NX61 479 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 MARCH4Q9P2E8 410 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 SLC27A5Q9Y2P5 690 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 CCL22O00626 93 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 HMBSP08397 361 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 COL6A1P12109 1028 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 FGFR3P22607 806 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 PBX3P40426 434 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 YBEYP58557 167 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 RING1Q06587 406 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 ACBD5Q5T8D3 534 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 NADSYN1Q6IA69 706 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 TMEM207Q6UWW9 146 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 ZNF354CQ86Y25 554 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 RNF135Q8IUD6 432 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 PELI3Q8N2H9 469 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 SPATA17Q96L03 361 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 MARK4Q96L34 752 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 B3GALT6Q96L58 329 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 RPRD1AQ96P16 312 aaPredicted RBP18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 CRISPLD1Q9H336 500 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 SRRDQ9UH36 339 aa18.46■□□□□ 0.55
SEMA3B-209ENST00000456560 MTMR11A4FU01 709 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 PRAMEF11O60813 436 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 ACVRL1P37023 503 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 ETFBP38117 255 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 SLC26A3P40879 764 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 MAPKAPK2P49137 400 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 CDKN2DP55273 166 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 KLC3Q6P597 504 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 LDB1Q86U70 411 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 HIPK4Q8NE63 616 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 OR6P1Q8NGX9 317 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 CEP70Q8NHQ1 597 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 PPP2R3CQ969Q6 453 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 FAR2Q96K12 515 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 SERPINI1Q99574 410 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 SUDS3Q9H7L9 328 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 CYP4F12Q9HCS2 524 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 TNFRSF12AQ9NP84 129 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 COMMD8Q9NX08 183 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 GTSE1Q9NYZ3 720 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 GREB1Q4ZG55 1949 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 MUSKO15146 869 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 GJB3O75712 270 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 ZDHHC11BP0C7U3 371 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 ARPP19P56211 112 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 ZNF423Q2M1K9 1284 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 PIGGQ5H8A4 983 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 RSPO2Q6UXX9 243 aaPredicted RBP18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 CHSY3Q70JA7 882 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 PDSS2Q86YH6 399 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 PGAM4Q8N0Y7 254 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 FEM1CQ96JP0 617 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 GLT1D1Q96MS3 346 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 CDRT15Q96T59 188 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 SEMA3CQ99985 751 aa18.45■□□□□ 0.54
SEMA3B-209ENST00000456560 TCAF2A6NFQ2 919 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 OR51F1A6NGY5 319 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 CASQ2O14958 399 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 TBC1D4O60343 1298 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 HSPA1AP0DMV8 641 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 HSPA1BP0DMV9 641 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 RAG1P15918 1043 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 GSTT1P30711 240 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 GALNT1Q10472 559 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 GPR17Q13304 367 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 BTG3Q14201 252 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 RFTN1Q14699 578 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 BNC2Q6ZN30 1099 aaPredicted RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 SPPL2BQ8TCT7 592 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 POLR1EQ9GZS1 481 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 PDFQ9HBH1 243 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 EML4Q9HC35 981 aaKnown RBP18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 MARCH5Q9NX47 278 aa18.44■□□□□ 0.54
SEMA3B-209ENST00000456560 PACSIN3Q9UKS6 424 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms