RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 CLCN5P51795 746 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 KPNA2P52292 529 aaKnown RBP17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 PSME3P61289 254 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 ACAP2Q15057 778 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 ARPINQ7Z6K5 226 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 MIB1Q86YT6 1006 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 OR52K2Q8NGK3 314 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 ARRDC2Q8TBH0 407 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 CALML6Q8TD86 181 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 SOCS4Q8WXH5 440 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 ATP6V1E2Q96A05 226 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 MYEOVQ96EZ4 313 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 TBATAQ96M53 351 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 ARHGAP39Q9C0H5 1083 aa17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 TRMT13Q9NUP7 481 aaKnown RBP17.67■□□□□ 0.42
CCDC144A-210ENST00000456009 DENRO43583 198 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 LDB2O43679 373 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PGM3O95394 542 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 CRTAMO95727 393 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 SLC4A1P02730 911 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 HMBSP08397 361 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PMLP29590 882 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 CDH13P55290 713 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 SATB1Q01826 763 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RALGDSQ12967 914 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PDAP1Q13442 181 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 LRP8Q14114 963 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 IL23RQ5VWK5 629 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RAP1GAP2Q684P5 730 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 FBXL22Q6P050 247 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 ZFP1Q6P2D0 407 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 ZNF598Q86UK7 904 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 SATL1Q86VE3 508 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 NUP93Q8N1F7 819 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 GALNT4Q8N4A0 578 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PTERQ96BW5 349 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 C3orf30Q96M34 536 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RANBP9Q96S59 729 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 SP110Q9HB58 689 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 CACNA2D2Q9NY47 1150 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 SCML2Q9UQR0 700 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 TRAF6Q9Y4K3 522 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PSMD12O00232 456 aaPredicted RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 SUPT7LO94864 414 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 OR6B1O95007 311 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 WISP3O95389 354 aaPredicted RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RBP1P09455 135 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 ATXN1LP0C7T5 689 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 ETS2P15036 469 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RHOQP17081 205 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 NDST2P52849 883 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 CDKL1Q00532 357 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 FASTKQ14296 549 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 KCNA10Q16322 511 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 CWF19L1Q69YN2 538 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 KLC3Q6P597 504 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 LAYNQ6UX15 382 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 RASAL3Q86YV0 1011 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 ATAD1Q8NBU5 361 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 EML4Q9HC35 981 aaKnown RBP17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 TMEM248Q9NWD8 314 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 GABRQQ9UN88 632 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 ARL5AQ9Y689 179 aa17.66■□□□□ 0.42
CCDC144A-210ENST00000456009 PRORSD1PA6NEY8 169 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 MUSKO15146 869 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 PIRTP0C851 137 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 IMPDH1P20839 514 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 PRAMEP78395 509 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 TIAL1Q01085 375 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 GPR162Q16538 588 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 RARS2Q5T160 578 aaKnown RBP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 C6orf52Q5T4I8 152 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 REP15Q6BDI9 236 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 ZNF549Q6P9A3 640 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 TMEM102Q8N9M5 508 aaPredicted RBP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 UROC1Q96N76 676 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 ZCWPW1Q9H0M4 648 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 GMPR2Q9P2T1 348 aaKnown RBP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 AP4B1Q9Y6B7 739 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 PATJQ8NI35 1801 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 MIA3Q5JRA6 1907 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 MYOCOSA0A1B0GUC4 107 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 LRRC14BA6NHZ5 514 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 TRIM38O00635 465 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 SLC7A4O43246 635 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 ACVRL1P37023 503 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 ROR2Q01974 943 aaKnown RBP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 ZNF678Q5SXM1 525 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 RYBPQ8N488 228 aaPredicted RBP17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 MARVELD2Q8N4S9 558 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 EXT2Q93063 718 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 CCDC126Q96EE4 140 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 CNBD2Q96M20 576 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 SLC39A3Q9BRY0 314 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 MFSD1Q9H3U5 465 aa17.65■□□□□ 0.42
CCDC144A-210ENST00000456009 RRAGCQ9HB90 399 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms