RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 IDNKQ5T6J7 187 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CCDC81Q6ZN84 652 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 LRRC47Q8N1G4 583 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CDC26Q8NHZ8 85 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TBC1D15Q8TC07 691 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SLC22A17Q8WUG5 538 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TNFAIP8L1Q8WVP5 186 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 EXOC2Q96KP1 924 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SLC9A7Q96T83 725 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FN3KQ9H479 309 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 VPS4AQ9UN37 437 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 C10orf71Q711Q0 1435 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SALL1Q9NSC2 1324 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PRORSD1PA6NEY8 169 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 H3BN98 237 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PTTG1O95997 202 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FAM153BP0C7A2 387 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GSSP48637 474 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RGS1Q08116 209 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GRIK2Q13002 908 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TTI2Q6NXR4 508 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FAM173BQ6P4H8 233 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CLVS1Q8IUQ0 354 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 LRRC34Q8IZ02 419 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ACTR8Q9H981 624 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 KCNQ5Q9NR82 932 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 WNK3Q9BYP7 1800 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RBAK-RBAKDNI3L0D1 243 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 DDX39AO00148 427 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 NR5A2O00482 541 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 INPP4BO15327 924 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CCNKO75909 580 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CLPXO76031 633 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RLN2P04090 185 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PABPC4LP0CB38 370 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GPC1P35052 558 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GNG2P59768 71 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF543Q08ER8 600 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GAS6Q14393 721 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 MAEAQ7L5Y9 396 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 UBE2Q1Q7Z7E8 422 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GALNT4Q8N4A0 578 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SLC7A6OSQ96CW6 309 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 DPY30Q9C005 99 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CST11Q9H112 138 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 MROH8Q9H579 483 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ARHGEF4Q9NR80 690 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 INTS10Q9NVR2 710 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 NUP188Q5SRE5 1749 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CCDC195A0A1B0GUA6 201 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TRIM64BA6NI03 449 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FADS2P1A8MWK0 482 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 MCIDASD6RGH6 385 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 AVILO75366 819 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CATP04040 527 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ATP12AP54707 1039 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 MST1RQ04912 1400 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 LRRN1Q6UXK5 716 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 OTOAQ7RTW8 1153 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CDYL2Q8N8U2 506 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ETNPPLQ8TBG4 499 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SETD6Q8TBK2 473 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 DNAJA4Q8WW22 397 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CAPSLQ8WWF8 208 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RHOJQ9H4E5 214 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ASB4Q9Y574 426 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 KCNE2Q9Y6J6 123 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TMEM131LA2VDJ0 1609 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ANPEPP15144 967 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CYP11B2P19099 503 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SLC6A2P23975 617 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 HTR2AP28223 471 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PTPN7P35236 360 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CDO1Q16878 200 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF57Q68EA5 555 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 UBASH3BQ8TF42 649 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PARK7Q99497 189 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 MIPEPQ99797 713 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 OPTCQ9UBM4 332 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FKBPLQ9UIM3 349 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 KIF28PB7ZC32 967 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PRKAR2AP13861 404 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 BTN3A2P78410 334 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CA9Q16790 459 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF697Q5TEC3 545 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 WDR59Q6PJI9 974 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ANKRD23Q86SG2 305 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ARMC8Q8IUR7 673 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SLC44A3Q8N4M1 653 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FNDC5Q8NAU1 212 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 LPCAT1Q8NF37 534 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 SNRNP27Q8WVK2 155 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 GSDMCQ9BYG8 508 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 FIS1Q9Y3D6 152 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 PCDHB1Q9Y5F3 818 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 NCF1P14598 390 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 TCN1P20061 433 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 RPP38P78345 283 aaKnown RBP5.23□□□□□ -1.57
CSMD3-204ENST00000455883 ANKRD40Q6AI12 368 aa5.23□□□□□ -1.57
CSMD3-204ENST00000455883 CRTC3Q6UUV7 619 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms