RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 FAF2Q96CS3 445 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 TBATAQ96M53 351 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 SLC13A1Q9BZW2 595 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 NT5MQ9NPB1 228 aa21.33■■□□□ 1.01
HMGB3-205ENST00000455596 USP24Q9UPU5 2620 aa21.33■■□□□ 1
HMGB3-205ENST00000455596 EPG5Q9HCE0 2579 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 MTA2O94776 668 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 PCCBP05166 539 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 KDELR1P24390 212 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 HTR1BP28222 390 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 DUSP3P51452 185 aaPredicted RBP21.32■■□□□ 1
HMGB3-205ENST00000455596 E2F1Q01094 437 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 PPARDQ03181 441 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 CAMK2BQ13554 666 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 FAXCQ5TGI0 409 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 ZCCHC8Q6NZY4 707 aaKnown RBP21.32■■□□□ 1
HMGB3-205ENST00000455596 PDCD7Q8N8D1 485 aaKnown RBP21.32■■□□□ 1
HMGB3-205ENST00000455596 RFFLQ8WZ73 363 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 IL12RB2Q99665 862 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 APOOQ9BUR5 198 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 USP29Q9HBJ7 922 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 INTUQ9ULD6 942 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 PHTF1Q9UMS5 762 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 FRYQ5TBA9 3013 aa21.32■■□□□ 1
HMGB3-205ENST00000455596 SPEGQ15772 3267 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 TRABD2BA6NFA1 517 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 SRRM3A6NNA2 597 aaPredicted RBP21.31■■□□□ 1
HMGB3-205ENST00000455596 A8MX80 341 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 TPP1O14773 563 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 RECQL5O94762 991 aaPredicted RBP21.31■■□□□ 1
HMGB3-205ENST00000455596 MAP3K6O95382 1288 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 CCNCP24863 283 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 BLKP51451 505 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 CLDN6P56747 220 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 ITKQ08881 620 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 TRAF2Q12933 501 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 NFATC4Q14934 902 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 PRRT3Q5FWE3 981 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 PROSER1Q86XN7 944 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 ATL2Q8NHH9 583 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 MDM1Q8TC05 714 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 ANP32EQ9BTT0 268 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 TCEAL2Q9H3H9 227 aaPredicted RBP21.31■■□□□ 1
HMGB3-205ENST00000455596 HAUS2Q9NVX0 235 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 B4GALT6Q9UBX8 382 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 SALL4Q9UJQ4 1053 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 PNMA8BQ9ULN7 279 aaPredicted RBP21.31■■□□□ 1
HMGB3-205ENST00000455596 OR1A2Q9Y585 309 aa21.31■■□□□ 1
HMGB3-205ENST00000455596 MATN3O15232 486 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 MX2P20592 715 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 DEFB133Q30KQ1 61 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 ARMC12Q5T9G4 340 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 ENPP7Q6UWV6 458 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 PQLC3Q8N755 202 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 RAPGEF5Q92565 580 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 MAML1Q92585 1016 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 FATE1Q969F0 183 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 TSGA13Q96PP4 275 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 RNF157Q96PX1 679 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 SEMA3CQ99985 751 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 LRRC61Q9BV99 259 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 POLR1EQ9GZS1 481 aaKnown RBP21.3■■□□□ 1
HMGB3-205ENST00000455596 NCKIPSDQ9NZQ3 722 aa21.3■■□□□ 1
HMGB3-205ENST00000455596 LY6G6EA0A0G2JKS1 128 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 LRRD1A4D1F6 860 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 GCATO75600 419 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 CYP2A6P11509 494 aaPredicted RBP21.29■■□□□ 1
HMGB3-205ENST00000455596 MYF5P13349 255 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 VIPR1P32241 457 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 HK3P52790 923 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 INSM1Q01101 510 aaPredicted RBP21.29■■□□□ 1
HMGB3-205ENST00000455596 GBE1Q04446 702 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 TARDBPQ13148 414 aaKnown RBP eCLIP21.29■■□□□ 1
HMGB3-205ENST00000455596 C1orf61Q13536 156 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 ACOX1Q15067 660 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 PLA2G15Q8NCC3 412 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 HDAC11Q96DB2 347 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 WDR92Q96MX6 357 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 DKK4Q9UBT3 224 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 KLQ9UEF7 1012 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 AMACRQ9UHK6 382 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 U3KQA8 63 aa21.29■■□□□ 1
HMGB3-205ENST00000455596 ZNF487B1APH4 448 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 TAF4O00268 1085 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 RASGRP1O95267 797 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 PGLSO95336 258 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 GP1BAP07359 652 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 ANXA6P08133 673 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 CTSEP14091 401 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 CCNB1P14635 433 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 GM2AP17900 193 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 CES1P23141 567 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 TCEAL1Q15170 157 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 CNGA3Q16281 694 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 ALG11Q2TAA5 492 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 VSIG1Q86XK7 387 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 HID1Q8IV36 788 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 NDUFAF2Q8N183 169 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 CACTIN-AS1Q8N1I8 211 aa21.28■■□□□ 1
HMGB3-205ENST00000455596 FSTL5Q8N475 847 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms