RNA–Protein interactions for RNA: ENST00000454994.3

AL139260.3-202, humanhuman

TSL 2

Gene AL139260.3, Length 2,381 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.3-202ENST00000454994 SPATS2LQ9NUQ6 558 aaKnown RBP13.62□□□□□ -0.23
AL139260.3-202ENST00000454994 VTI1BQ9UEU0 232 aa13.62□□□□□ -0.23
AL139260.3-202ENST00000454994 DSEQ9UL01 958 aa13.62□□□□□ -0.23
AL139260.3-202ENST00000454994 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
AL139260.3-202ENST00000454994 PCDHGA7Q9Y5G6 932 aa13.62□□□□□ -0.23
AL139260.3-202ENST00000454994 A0A087X1B8 175 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 A0A0U1RQS6 177 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 RNASEH2AO75792 299 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 COL6A2P12110 1019 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 PAMP19021 973 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 OR1G1P47890 313 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CAP1Q01518 475 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 PFKPQ01813 784 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 POU4F1Q01851 419 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 NRF1Q16656 503 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 TRIM71Q2Q1W2 868 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CILP2Q8IUL8 1156 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CFAP52Q8N1V2 620 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 OR13C4Q8NGS5 318 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 MAELQ96JY0 434 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 SUSD3Q96L08 255 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 TBATAQ96M53 351 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 UROC1Q96N76 676 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 NSUN5Q96P11 429 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 SLC25A51Q9H1U9 297 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 GSTO2Q9H4Y5 243 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 ACOT8O14734 319 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 AHCYL1O43865 530 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 NPHS1O60500 1241 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 IPO13O94829 963 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 SUPT7LO94864 414 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CRTAMO95727 393 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 LTA4HP09960 611 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 ME2P23368 584 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 GSTT1P30711 240 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CYP2C18P33260 490 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 ZNF135P52742 658 aaPredicted RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 FOXA1P55317 472 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 TBX4P57082 545 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 FAM83EQ2M2I3 478 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 LIN52Q52LA3 116 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 MARC1Q5VT66 337 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 REP15Q6BDI9 236 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 TIGD7Q6NT04 549 aaPredicted RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 PIWIL4Q7Z3Z4 852 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 ZNF683Q8IZ20 524 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 DNAJC1Q96KC8 554 aaKnown RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 SERPINI1Q99574 410 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CCDC28BQ9BUN5 200 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 TBC1D13Q9NVG8 400 aa13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.61□□□□□ -0.23
AL139260.3-202ENST00000454994 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 A0A1B0GVG6 124 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 HEATR9A2RTY3 570 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 SMIM18P0DKX4 95 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 SOX11P35716 441 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PBX3P40426 434 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PRKAA2P54646 552 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PSME3P61289 254 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 IRX1P78414 480 aaPredicted RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ZNF33AQ06730 810 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 FASTKQ14296 549 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PTPRRQ15256 657 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ZNF549Q6P9A3 640 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 CEP70Q8NHQ1 597 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 EXOC2Q96KP1 924 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 TRAPPC9Q96Q05 1148 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 CYP2S1Q96SQ9 504 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 CRISPLD1Q9H336 500 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 FNDC3AQ9Y2H6 1198 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 SQORQ9Y6N5 450 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PRORSD1PA6NEY8 169 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 AP3B1O00203 1094 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 INPPL1O15357 1258 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ALDH1A1P00352 501 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ALDOCP09972 364 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ATXN1LP0C7T5 689 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ATP6V1B1P15313 513 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 LEPRP48357 1165 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PRAMEP78395 509 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 CLLU1OSQ5K130 101 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 BEND5Q7L4P6 421 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ZNF598Q86UK7 904 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 ST13P4Q8IZP2 240 aaPredicted RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 LZTR1Q8N653 840 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PDCD6IPQ8WUM4 868 aaKnown RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 NAT14Q8WUY8 206 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 SERPINB11Q96P15 392 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 SPATA16Q9BXB7 569 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 TRIM4Q9C037 500 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 VCX3BQ9H321 246 aa13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
AL139260.3-202ENST00000454994 VPS45Q9NRW7 570 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms