RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PIP4K2CQ8TBX8 421 aa16.73■□□□□ 0.27
LINC00963-208ENST00000454968 GRIN3AQ8TCU5 1115 aa16.73■□□□□ 0.27
LINC00963-208ENST00000454968 ZNF446Q9NWS9 450 aa16.73■□□□□ 0.27
LINC00963-208ENST00000454968 MOCS1Q9NZB8 636 aa16.73■□□□□ 0.27
LINC00963-208ENST00000454968 ZC3H7BQ9UGR2 993 aaKnown RBP16.73■□□□□ 0.27
LINC00963-208ENST00000454968 CA14Q9ULX7 337 aa16.73■□□□□ 0.27
LINC00963-208ENST00000454968 MMP17Q9ULZ9 603 aa16.73■□□□□ 0.27
LINC00963-208ENST00000454968 MRPS17Q9Y2R5 130 aaKnown RBP16.73■□□□□ 0.27
LINC00963-208ENST00000454968 KANSL1LA0AUZ9 987 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 KLF8O95600 359 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-208ENST00000454968 TIMP2P16035 220 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 SLC8A1P32418 973 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 CASP8Q14790 479 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 POU6F1Q14863 301 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 CRYMQ14894 314 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 TAF1AQ15573 450 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-208ENST00000454968 UGP2Q16851 508 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 ANKRD20A4Q4UJ75 823 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 KIAA1211LQ6NV74 962 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 MDGA1Q8NFP4 955 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 PDCD6IPQ8WUM4 868 aaKnown RBP16.72■□□□□ 0.27
LINC00963-208ENST00000454968 RMDN1Q96DB5 314 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 ZNF778Q96MU6 729 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 FCRL3Q96P31 734 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-208ENST00000454968 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
LINC00963-208ENST00000454968 HDAC8Q9BY41 377 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 VIPAS39Q9H9C1 493 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 CHRAC1Q9NRG0 131 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 NFS1Q9Y697 457 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 FAM169AQ9Y6X4 670 aa16.72■□□□□ 0.27
LINC00963-208ENST00000454968 UPK3BL1B0FP48 263 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 UPK3BL2E5RIL1 263 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 POLBP06746 335 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 HOXB2P14652 356 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 COL9A1P20849 921 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 SSTR1P30872 391 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 HMGCLP35914 325 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 ZNF140P52738 457 aaPredicted RBP16.71■□□□□ 0.27
LINC00963-208ENST00000454968 SATB1Q01826 763 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 LRRC32Q14392 662 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 SLC29A2Q14542 456 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 SPANXN3Q5MJ09 141 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 EOGTQ5NDL2 527 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 HP1BP3Q5SSJ5 553 aaPredicted RBP16.71■□□□□ 0.27
LINC00963-208ENST00000454968 SDE2Q6IQ49 451 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 PARS2Q7L3T8 475 aaKnown RBP16.71■□□□□ 0.27
LINC00963-208ENST00000454968 CBARPQ8N350 705 aaPredicted RBP16.71■□□□□ 0.27
LINC00963-208ENST00000454968 PPHLN1Q8NEY8 458 aaKnown RBP16.71■□□□□ 0.27
LINC00963-208ENST00000454968 OR13J1Q8NGT2 312 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 RPLP0P6Q8NHW5 317 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 GSDMBQ8TAX9 411 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 CLDN23Q96B33 292 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 ARRDC3Q96B67 414 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 EID2BQ96D98 161 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 SMIM14Q96QK8 99 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.71■□□□□ 0.276e-7■■■■□ 25.7
LINC00963-208ENST00000454968 SAMD15Q9P1V8 674 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 MAD1L1Q9Y6D9 718 aa16.71■□□□□ 0.27
LINC00963-208ENST00000454968 TCRBV9S1A1TA0A576 114 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 C16orf96A6NNT2 1141 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 C1QTNF3-AMACRE9PGA6 284 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 AURKAO14965 403 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 AREL1O15033 823 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 SPINT1O43278 529 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 SYNCRIPO60506 623 aaKnown RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 TCEA3O75764 348 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 PRKCGP05129 697 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 ARNTP27540 789 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 DRD3P35462 400 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 HNF1BP35680 557 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 WASP42768 502 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 ARCN1P48444 511 aaKnown RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 EPHB1P54762 984 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 STARD3Q14849 445 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 TSTD2Q5T7W7 516 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 FAM46CQ5VWP2 391 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 KIAA0930Q6ICG6 404 aaPredicted RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 C3orf62Q6ZUJ4 267 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 HDXQ7Z353 690 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 PALM2Q8IXS6 379 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 RAVER1Q8IY67 606 aaKnown RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 NDUFAF2Q8N183 169 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 STYXQ8WUJ0 223 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 MFSD3Q96ES6 412 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 SGSM3Q96HU1 749 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 PPP1R16AQ96I34 528 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 TMEM109Q9BVC6 243 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 MKRN2Q9H000 416 aaKnown RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 ACSS3Q9H6R3 686 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 FETUBQ9UGM5 382 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 MUTYHQ9UIF7 546 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 NDRG2Q9UN36 371 aaKnown RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 ZNF711Q9Y462 761 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 MTF2Q9Y483 593 aaPredicted RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 RPS6KL1Q9Y6S9 549 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 NPIPB15A6NHN6 443 aaPredicted RBP16.7■□□□□ 0.26
LINC00963-208ENST00000454968 H7C0S8 307 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 ATP8B1O43520 1251 aa16.7■□□□□ 0.26
LINC00963-208ENST00000454968 ACSL3O95573 720 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms