RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RPL26L1Q9UNX3 145 aaKnown RBP28.12■■■□□ 2.09
SMARCC1-203ENST00000454240 LIASO43766 372 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 TM7SF2O76062 418 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 FGGP02679 453 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 CD38P28907 300 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 LIG3P49916 1009 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 SGCGQ13326 291 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 TEAD4Q15561 434 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 ANKRD20A2Q5SQ80 823 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 ANKRD20A1Q5TYW2 823 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 ANKRD20A3Q5VUR7 823 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 LIPIQ6XZB0 460 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 NDUFAF2Q8N183 169 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 MAIP1Q8WWC4 291 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 FSCN3Q9NQT6 498 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 AASDHPPTQ9NRN7 309 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 RXFP3Q9NSD7 469 aa28.11■■■□□ 2.09
SMARCC1-203ENST00000454240 A0A0J9YYE9 177 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 C5orf60A6NFR6 353 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 STK10O94804 968 aaKnown RBP28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 TRBC1P01850 177 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 WNT1P04628 370 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 C6P13671 934 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 AKT2P31751 481 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 BNC1Q01954 994 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 STAT4Q14765 748 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 OASLQ15646 514 aaKnown RBP28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 RASGEF1CQ8N431 466 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 C1orf54Q8WWF1 131 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 SPATA13Q96N96 652 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 TRIB3Q96RU7 358 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 KLF6Q99612 283 aaPredicted RBP28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 TMEM121Q9BTD3 319 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 FZD3Q9NPG1 666 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 FAM153AQ9UHL3 310 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 RSPH14Q9UHP6 348 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 TMEM131Q92545 1883 aa28.1■■■□□ 2.09
SMARCC1-203ENST00000454240 ARHGAP33O14559 1287 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 VILLO15195 856 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 RAD51BO15315 384 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 SYPP08247 313 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 CTPS1P17812 591 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 ENGP17813 658 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 VIPR1P32241 457 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 EPHB1P54762 984 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 AGERQ15109 404 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 PTPRRQ15256 657 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 CCNG2Q16589 344 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 AASDHQ4L235 1098 aaPredicted RBP28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 ITPRIPL1Q6GPH6 555 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 USP45Q70EL2 814 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 CBARPQ8N350 705 aaPredicted RBP28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 MFSD2AQ8NA29 543 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 CCDC110Q8TBZ0 833 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 ADGRE3Q9BY15 652 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 GBA3Q9H227 469 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 UBP1Q9NZI7 540 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 ZKSCAN5Q9Y2L8 839 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 HS3ST3A1Q9Y663 406 aa28.09■■■□□ 2.09
SMARCC1-203ENST00000454240 A0A1B0GVT2 93 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 NPIPB15A6NHN6 443 aaPredicted RBP28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 A8MX80 341 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 ANKRD66B4E2M5 251 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 ALPIP09923 528 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 CYP2A6P11509 494 aaPredicted RBP28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 HNF1BP35680 557 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 GNG11P61952 73 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 LMNB2Q03252 620 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 CDK18Q07002 472 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 GRIK2Q13002 908 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 LONRF2Q1L5Z9 754 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 KDELC1Q6UW63 502 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 LAYNQ6UX15 382 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 IQCHQ86VS3 1027 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 FAM71DQ8N9W8 422 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 DENND6BQ8NEG7 585 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 LPCAT1Q8NF37 534 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 CENPTQ96BT3 561 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 OXNAD1Q96HP4 312 aaPredicted RBP28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 SMIM14Q96QK8 99 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 OSBPL9Q96SU4 736 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 MYOCQ99972 504 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 ZDHHC5Q9C0B5 715 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 TTC7AQ9ULT0 858 aaPredicted RBP28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 SNX12Q9UMY4 172 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 CA5BQ9Y2D0 317 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 ANKRD6Q9Y2G4 727 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 COQ6Q9Y2Z9 468 aa28.08■■■□□ 2.09
SMARCC1-203ENST00000454240 GDF9O60383 454 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 OPHN1O60890 802 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 PMPCBO75439 489 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 HEXIM1O94992 359 aaKnown RBP28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 ELFN1P0C7U0 828 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 LHCGRP22888 699 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 STIP1P31948 543 aaKnown RBP28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 GDF10P55107 478 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 PCSK7Q16549 785 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 QPCTQ16769 361 aa28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 DRICH1Q6PGQ1 229 aaPredicted RBP28.07■■■□□ 2.08
SMARCC1-203ENST00000454240 GCNT7Q6ZNI0 430 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms