RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ATG14Q6ZNE5 492 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 CCNJLQ8IV13 435 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 JOSD2Q8TAC2 188 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 WDR92Q96MX6 357 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 ZNF641Q96N77 438 aaPredicted RBP11.75□□□□□ -0.53
HERC3-207ENST00000452979 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
HERC3-207ENST00000452979 ARHGAP9Q9BRR9 750 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 SUV39H2Q9H5I1 410 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 PCDH12Q9NPG4 1184 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 LHX3Q9UBR4 397 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 KLQ9UEF7 1012 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 PISDQ9UG56 409 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 NOCTQ9UK39 431 aaKnown RBP11.75□□□□□ -0.53
HERC3-207ENST00000452979 DAAM1Q9Y4D1 1078 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 OR1A2Q9Y585 309 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
HERC3-207ENST00000452979 PRAMEF33A0A0G2JMD5 474 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 A0A1W2PQC6 194 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 TMEM202A6NGA9 273 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 TNFRSF10CO14798 259 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 TEX33O43247 280 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 NUDT21O43809 227 aaKnown RBP11.74□□□□□ -0.53
HERC3-207ENST00000452979 PRAMEF10O60809 474 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 PIGNO95427 931 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 CHRNB2P17787 502 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 ITIH1P19827 911 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 XPAP23025 273 aaPredicted RBP11.74□□□□□ -0.53
HERC3-207ENST00000452979 CD82P27701 267 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 RFC1P35251 1148 aaPredicted RBP11.74□□□□□ -0.53
HERC3-207ENST00000452979 LIG3P49916 1009 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 GSCP56915 257 aaPredicted RBP11.74□□□□□ -0.53
HERC3-207ENST00000452979 KIAA1024LP59773 190 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 CDR2Q01850 454 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 PTP4A2Q12974 167 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 HLTFQ14527 1009 aaKnown RBP eCLIP11.74□□□□□ -0.53
HERC3-207ENST00000452979 TBR1Q16650 682 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 PARP15Q460N3 678 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 C14orf28Q4W4Y0 310 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 MANEAQ5SRI9 462 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 KCTD16Q68DU8 428 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 ERAP2Q6P179 960 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 BRAT1Q6PJG6 821 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 SPRED1Q7Z699 444 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 DNAAF5Q86Y56 855 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 SLITRK4Q8IW52 837 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 UMODL1-AS1Q8N2C9 162 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 NETO2Q8NC67 525 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 FAM172AQ8WUF8 416 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 SLC20A1Q8WUM9 679 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 FUBP1Q96AE4 644 aaKnown RBP11.74□□□□□ -0.53
HERC3-207ENST00000452979 PDXPQ96GD0 296 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 CMKLR1Q99788 373 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 IFNKQ9P0W0 207 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 PCDHB11Q9Y5F2 797 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 RNF215Q9Y6U7 377 aa11.74□□□□□ -0.53
HERC3-207ENST00000452979 C9orf172C9J069 976 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 RASA4BC9J798 803 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 RASA4O43374 803 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 BUB1BO60566 1050 aaPredicted RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 SERPINC1P01008 464 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 FAM87AP0C7U9 286 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 KRT3P12035 628 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 UNGP13051 313 aaPredicted RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 WT1P19544 449 aaPredicted RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 EPHB2P29323 1055 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 TRIM23P36406 574 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 MMP12P39900 470 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 ETV5P41161 510 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 CSNK1DP48730 415 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 KLK7P49862 253 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 B4GALNT1Q00973 533 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 FMO1Q01740 532 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
HERC3-207ENST00000452979 TCEA2Q15560 299 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 SARM1Q6SZW1 724 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 TMPRSS9Q7Z410 1059 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 PHLDB2Q86SQ0 1253 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 C17orf82Q86X59 251 aaPredicted RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 ZFAND4Q86XD8 727 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 ZNF354CQ86Y25 554 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 Q8N9G6 341 aaPredicted RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 PLA2G15Q8NCC3 412 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 FAM46DQ8NEK8 389 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 OR56A4Q8NGH8 313 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 OR1E3Q8WZA6 343 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 USP7Q93009 1102 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 EXOC2Q96KP1 924 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 TUBGCP5Q96RT8 1024 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 XPO4Q9C0E2 1151 aaKnown RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 PDFQ9HBH1 243 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
HERC3-207ENST00000452979 FOXJ2Q9P0K8 574 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
HERC3-207ENST00000452979 SIGLEC16A6NMB1 481 aa11.72□□□□□ -0.53
HERC3-207ENST00000452979 CACNB4O00305 520 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms