RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 KHDC1Q4VXA5 237 aaKnown RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 SLC39A11Q8N1S5 342 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 OR6Y1Q8NGX8 325 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 WDR60Q8WVS4 1066 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 PLD4Q96BZ4 506 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 FEM1CQ96JP0 617 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 ALG9Q9H6U8 611 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 ZNF334Q9HCZ1 680 aaPredicted RBP11.83□□□□□ -0.52
VTA1-203ENST00000452973 TBX21Q9UL17 535 aa11.83□□□□□ -0.52
VTA1-203ENST00000452973 MICAL3Q7RTP6 2002 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 TMEM114B3SHH9 223 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 JUNP05412 331 aaKnown RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 KCNA5P22460 613 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 ABL2P42684 1182 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 RPL14P50914 215 aaKnown RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 EPHB3P54753 998 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 SEMA3AQ14563 771 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 KIAA0408Q6ZU52 694 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 GLT6D1Q7Z4J2 308 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 OR4K2Q8NGD2 314 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 FATE1Q969F0 183 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 PAWRQ96IZ0 340 aaKnown RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 PSKH2Q96QS6 385 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 RANBP9Q96S59 729 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 DRC3Q9H069 523 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 TCF7L2Q9NQB0 619 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 DNAJC28Q9NX36 388 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 SPG21Q9NZD8 308 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 VPS28Q9UK41 221 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 A0A087X1B8 175 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 TEX28O15482 410 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 INSIG1O15503 277 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 KDELR3O43731 214 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 PEX11AO75192 247 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 NDST3O95803 873 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 CLTBP09497 229 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 COL6A2P12110 1019 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 CD1EP15812 388 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 CSRP3P50461 194 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 CLCN5P51795 746 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 ZXDBP98169 803 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 ACBD5Q5T8D3 534 aaPredicted RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 SEL1L3Q68CR1 1132 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 TRIM67Q6ZTA4 783 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 TMPRSS6Q8IU80 811 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 RNF168Q8IYW5 571 aaPredicted RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 MAB21L3Q8N8X9 362 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 DTX3LQ8TDB6 740 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 BRSK1Q8TDC3 778 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 MRPL57Q9BQC6 102 aaKnown RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 SIKE1Q9BRV8 207 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 KLF16Q9BXK1 252 aaPredicted RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 TM6SF2Q9BZW4 377 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 MFSD1Q9H3U5 465 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 FAM96AQ9H5X1 160 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 TLE6Q9H808 572 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 MRPL17Q9NRX2 175 aaKnown RBP11.82□□□□□ -0.52
VTA1-203ENST00000452973 IGSF5Q9NSI5 407 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 FAM50BQ9Y247 325 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 INSL5Q9Y5Q6 135 aa11.82□□□□□ -0.52
VTA1-203ENST00000452973 SKAP2O75563 359 aaPredicted RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 PAPSS2O95340 614 aaPredicted RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 PARNO95453 639 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 EFEMP2O95967 443 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 SH2D4BQ5SQS7 431 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 AGAP9Q5VTM2 703 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TMEM198Q66K66 360 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TPGS2Q68CL5 300 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 KLC3Q6P597 504 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 EPGNQ6UW88 154 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TMEM207Q6UWW9 146 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TPGS1Q6ZTW0 290 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TMEM150AQ86TG1 271 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 RDH11Q8TC12 318 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TADA1Q96BN2 335 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 MGME1Q9BQP7 344 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 ZBED2Q9BTP6 218 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 FCF1Q9Y324 198 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 RAP2CQ9Y3L5 183 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CPQQ9Y646 472 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TARM1B6A8C7 271 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 ZBTB14O43829 449 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CKMP06732 381 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 LTA4HP09960 611 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 GABRR2P28476 465 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 CDKN1CP49918 316 aaPredicted RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 GTF2A1P52655 376 aaPredicted RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 CYTH1Q15438 398 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TSNAXIP1Q2TAA8 658 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 ATXN7L2Q5T6C5 722 aaPredicted RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 OR4L1Q8NH43 312 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 SHKBP1Q8TBC3 707 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 SCG3Q8WXD2 468 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 TMA16Q96EY4 203 aaKnown RBP11.81□□□□□ -0.52
VTA1-203ENST00000452973 ZNF599Q96NL3 588 aa11.81□□□□□ -0.52
VTA1-203ENST00000452973 TOX2Q96NM4 488 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms