RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 CCNJLQ8IV13 435 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 PSTKQ8IV42 348 aaKnown RBP11.7□□□□□ -0.54
COPS7B-213ENST00000449174 GPR156Q8NFN8 814 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 OR56A4Q8NGH8 313 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 ECHDC3Q96DC8 303 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 ERGIC2Q96RQ1 377 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 CINPQ9BW66 212 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-213ENST00000449174 PARVAQ9NVD7 372 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 FANCLQ9NW38 375 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 LIMA1Q9UHB6 759 aaKnown RBP11.7□□□□□ -0.54
COPS7B-213ENST00000449174 AP4E1Q9UPM8 1137 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 COQ6Q9Y2Z9 468 aa11.7□□□□□ -0.54
COPS7B-213ENST00000449174 A0A1W2PQM1 296 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 J3KR12 359 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 EEF2KO00418 725 aaKnown RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 NVLO15381 856 aaKnown RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 DAPK3O43293 454 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 NUDT21O43809 227 aaKnown RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 BUB1BO60566 1050 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 ELFN1P0C7U0 828 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 JMJD7P0C870 316 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 SLC5A2P31639 672 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 UGT1A5P35504 534 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 TRIM23P36406 574 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 PAPOLAP51003 745 aaKnown RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 AP1S1P61966 158 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 CCL7P80098 99 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 MYL5Q02045 173 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 UBXN1Q04323 297 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 BCL2L1Q07817 233 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 PEX6Q13608 980 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 CLPPQ16740 277 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 ZSCAN23Q3MJ62 389 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 CERCAMQ5T4B2 595 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 ERMARDQ5T6L9 678 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 TMCO4Q5TGY1 634 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 AFMIDQ63HM1 303 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 RBM43Q6ZSC3 357 aaKnown RBP11.69□□□□□ -0.54
COPS7B-213ENST00000449174 DPPA4Q7L190 304 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 CAMK1DQ8IU85 385 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 KIAA1524Q8TCG1 905 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 CMKLR1Q99788 373 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 B3GNT4Q9C0J1 378 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 SP110Q9HB58 689 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 SEPT10Q9P0V9 454 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 RABGEF1Q9UJ41 708 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 MYO6Q9UM54 1294 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 LRRK1Q38SD2 2015 aa11.69□□□□□ -0.54
COPS7B-213ENST00000449174 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 PMS2P1A4D2B8 440 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 RNF8O76064 485 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 RECQL5O94762 991 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ITGB2P05107 769 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 LIPCP11150 499 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 PSMA2P25787 234 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 CD82P27701 267 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 HSPA9P38646 679 aaKnown RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 HCAR3P49019 387 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ZFP36L1Q07352 338 aaKnown RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 IL10RBQ08334 325 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 RALGDSQ12967 914 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 MAMLD1Q13495 774 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 LY6DQ14210 128 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 C14orf28Q4W4Y0 310 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 LIPIQ6XZB0 460 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 RFX8Q6ZV50 586 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 TAF8Q7Z7C8 310 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 B3GNT8Q7Z7M8 397 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ZSWIM9Q86XI8 627 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 LZTR1Q8N653 840 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 PAF1Q8N7H5 531 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 NETO2Q8NC67 525 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 FAM46DQ8NEK8 389 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 FNIP1Q8TF40 1166 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 FUBP1Q96AE4 644 aaKnown RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 PDXPQ96GD0 296 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 CELF6Q96J87 481 aaKnown RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 FOXP3Q9BZS1 431 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 SLC39A8Q9C0K1 460 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 DHX35Q9H5Z1 703 aaKnown RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 WDR26Q9H7D7 661 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ANO10Q9NW15 660 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 AKAP7Q9P0M2 348 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-213ENST00000449174 LOXL2Q9Y4K0 774 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ATMQ13315 3056 aa11.68□□□□□ -0.54
COPS7B-213ENST00000449174 ASXL3Q9C0F0 2248 aa11.67□□□□□ -0.54
COPS7B-213ENST00000449174 HELZ2Q9BYK8 2649 aaKnown RBP11.67□□□□□ -0.54
COPS7B-213ENST00000449174 MGAQ8IWI9 3026 aa11.67□□□□□ -0.54
COPS7B-213ENST00000449174 PRPSAP2O60256 369 aa11.67□□□□□ -0.54
COPS7B-213ENST00000449174 ZIC2O95409 532 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-213ENST00000449174 SFTPCP11686 197 aa11.67□□□□□ -0.54
COPS7B-213ENST00000449174 MYCLP1P12525 358 aaPredicted RBP11.67□□□□□ -0.54
COPS7B-213ENST00000449174 ATP1A3P13637 1013 aa11.67□□□□□ -0.54
COPS7B-213ENST00000449174 TNFAIP3P21580 790 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms