RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 CCL26Q9Y258 94 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 CCDC162PA2VCL2 907 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 CRTAMO95727 393 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 FGF19O95750 216 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 APOA4P06727 396 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 SBK3P0C264 359 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 RALBP11234 206 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 PSMA3P25788 255 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 SLC1A6P48664 564 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 RHOAP61586 193 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 SHHQ15465 462 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 TPGS1Q6ZTW0 290 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 LDB1Q86U70 411 aaPredicted RBP17.78■□□□□ 0.44
LMNA-208ENST00000448611 ARID3BQ8IVW6 561 aaPredicted RBP17.78■□□□□ 0.44
LMNA-208ENST00000448611 MICALL1Q8N3F8 863 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 LPCAT1Q8NF37 534 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 MDGA1Q8NFP4 955 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 FIBINQ8TAL6 211 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 SH3RF2Q8TEC5 729 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 GPR78Q96P69 363 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 NDNQ99608 321 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 GDF15Q99988 308 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 NLE1Q9NVX2 485 aaPredicted RBP17.78■□□□□ 0.44
LMNA-208ENST00000448611 NUMBLQ9Y6R0 609 aa17.78■□□□□ 0.44
LMNA-208ENST00000448611 GRM6O15303 877 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 LYPLA1O75608 230 aaPredicted RBP17.77■□□□□ 0.44
LMNA-208ENST00000448611 GLP2RO95838 553 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 PTPN2P17706 415 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 DDX6P26196 483 aaKnown RBP eCLIP17.77■□□□□ 0.443e-7■■■■■ 45
LMNA-208ENST00000448611 LMAN2Q12907 356 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 TEAD2Q15562 447 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 TAF1AQ15573 450 aaPredicted RBP17.77■□□□□ 0.44
LMNA-208ENST00000448611 HSF5Q4G112 596 aaPredicted RBP17.77■□□□□ 0.44
LMNA-208ENST00000448611 RALGPS1Q5JS13 557 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 RETSATQ6NUM9 610 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 ATG14Q6ZNE5 492 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 CMTM8Q8IZV2 173 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 RIN3Q8TB24 985 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 RDH11Q8TC12 318 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 PPM1EQ8WY54 764 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 ACDQ96AP0 544 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 SMIM14Q96QK8 99 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 OLFM1Q99784 485 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 ADGRE3Q9BY15 652 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 KCNK4Q9NYG8 393 aa17.77■□□□□ 0.44
LMNA-208ENST00000448611 CPSF2Q9P2I0 782 aaKnown RBP17.77■□□□□ 0.44
LMNA-208ENST00000448611 RUVBL2Q9Y230 463 aaKnown RBP17.77■□□□□ 0.44
LMNA-208ENST00000448611 HELZP42694 1942 aaKnown RBP17.77■□□□□ 0.43
LMNA-208ENST00000448611 A0A087X1B8 175 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 ANKRD66B4E2M5 251 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 TARM1B6A8C7 271 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 K7ERQ8 282 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 KLHL2O95198 593 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 RHOP08100 348 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 MYL2P10916 166 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 EPCAMP16422 314 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 HOXA9P31269 272 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 ARRB2P32121 409 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 NCALDP61601 193 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 MLLT1Q03111 559 aaPredicted RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 DLG1Q12959 904 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 ITGA9Q13797 1035 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 SPDYAQ5MJ70 313 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 GLT6D1Q7Z4J2 308 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 CDKN2AIPNLQ96HQ2 116 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 TSNARE1Q96NA8 513 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 SORT1Q99523 831 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 ECT2Q9H8V3 914 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 KIAA1522Q9P206 1035 aaPredicted RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 MID2Q9UJV3 735 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 TK2O00142 265 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 CD3EAPO15446 510 aaKnown RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 FZD6O60353 706 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 DNAJC6O75061 913 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 MYOGP15173 224 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 CD70P32970 193 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 SLC12A2P55011 1212 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 SEMA3AQ14563 771 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 SLC5A9Q2M3M2 681 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 ATXN7L2Q5T6C5 722 aaPredicted RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 HECTD2Q5U5R9 776 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 MRNIPQ6NTE8 343 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 ZYG11AQ6WRX3 759 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 CCDC91Q7Z6B0 441 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 MTDHQ86UE4 582 aaKnown RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 FSTL5Q8N475 847 aaPredicted RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 SKA1Q96BD8 255 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 NXNL1Q96CM4 212 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 LMLNQ96KR4 655 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 HEY2Q9UBP5 337 aa17.76■□□□□ 0.43
LMNA-208ENST00000448611 MARCOQ9UEW3 520 aaPredicted RBP17.76■□□□□ 0.43
LMNA-208ENST00000448611 DOCK6Q96HP0 2047 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 CLASP2O75122 1294 aaKnown RBP17.75■□□□□ 0.43
LMNA-208ENST00000448611 SLC8A1P32418 973 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 SKIV2L2P42285 1042 aaKnown RBP17.75■□□□□ 0.43
LMNA-208ENST00000448611 GLRBP48167 497 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 PLK1P53350 603 aa17.75■□□□□ 0.43
LMNA-208ENST00000448611 ABCE1P61221 599 aaKnown RBP17.75■□□□□ 0.43
LMNA-208ENST00000448611 PLEKHG6Q3KR16 790 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms