RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 LAYNQ6UX15 382 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 ATP6V0D2Q8N8Y2 350 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 C1orf74Q96LT6 269 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 NSUN5Q96P11 429 aaKnown RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 VPS45Q9NRW7 570 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 RAP2CQ9Y3L5 183 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 LRRC42Q9Y546 428 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 MIA3Q5JRA6 1907 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 PATJQ8NI35 1801 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 UBA6A0AVT1 1052 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 NCF1BA6NI72 391 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 SLC38A8A6NNN8 435 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 NCF1CA8MVU1 366 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 ARVCFO00192 962 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 SNAP91O60641 907 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 CABYRO75952 493 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 S1PR4O95977 384 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 NCF1P14598 390 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 MRPL58Q14197 206 aaKnown RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 BEND5Q7L4P6 421 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 KLHDC8BQ8IXV7 354 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 FBXO22Q8NEZ5 403 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 FUBP3Q96I24 572 aaKnown RBP eCLIP14.87□□□□□ -0.03
SF1-211ENST00000448404 PRICKLE1Q96MT3 831 aaPredicted RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 KCNA7Q96RP8 456 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 SLC22A12Q96S37 553 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 TSC22D3Q99576 134 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 MRPL46Q9H2W6 279 aaKnown RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 PIDD1Q9HB75 910 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 TLR9Q9NR96 1032 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 PAPOLBQ9NRJ5 636 aaKnown RBP14.87□□□□□ -0.03
SF1-211ENST00000448404 NCKIPSDQ9NZQ3 722 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 STOML1Q9UBI4 398 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 IKZF3Q9UKT9 509 aa14.87□□□□□ -0.03
SF1-211ENST00000448404 HEATR9A2RTY3 570 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 FGFR3P22607 806 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 ZNF135P52742 658 aaPredicted RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 EFHBQ8N7U6 833 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 TMA16Q96EY4 203 aaKnown RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 IFT43Q96FT9 208 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 TRIM62Q9BVG3 475 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.86□□□□□ -0.038e-10■■■□□ 18.4
SF1-211ENST00000448404 STX18Q9P2W9 335 aaKnown RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 POMPQ9Y244 141 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 H3BMM5 538 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 COCHO43405 550 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 UBTFL6P0CB48 400 aaPredicted RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 HOXD9P28356 352 aaPredicted RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 VHLP40337 213 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 RPS6KA3P51812 740 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 SULT2A1Q06520 285 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 GPR17Q13304 367 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 IZUMO2Q6UXV1 221 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 PCDH20Q8N6Y1 951 aaKnown RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 RMDN1Q96DB5 314 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 TRIM8Q9BZR9 551 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 UBE2OQ9C0C9 1292 aaKnown RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 ADAMTS6Q9UKP5 1117 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 COPG1Q9Y678 874 aaKnown RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 USP34Q70CQ2 3546 aa14.86□□□□□ -0.03
SF1-211ENST00000448404 KIAA0100Q14667 2235 aaKnown RBP14.86□□□□□ -0.03
SF1-211ENST00000448404 A8MX80 341 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 PAMP19021 973 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 SOX11P35716 441 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 ECT2LQ008S8 904 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 TIAL1Q01085 375 aaKnown RBP eCLIP14.85□□□□□ -0.037e-8■■■■□ 22.6
SF1-211ENST00000448404 NSUN2Q08J23 767 aaKnown RBP eCLIP14.85□□□□□ -0.03
SF1-211ENST00000448404 PLD1Q13393 1074 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 DNAL1Q4LDG9 190 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 FSCBQ5H9T9 825 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 TECRLQ5HYJ1 363 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 CDRT15Q96T59 188 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 SLC39A3Q9BRY0 314 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 UNC93B1Q9H1C4 597 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 ATP13A1Q9HD20 1204 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 HMX1Q9NP08 348 aaPredicted RBP14.85□□□□□ -0.03
SF1-211ENST00000448404 PLK2Q9NYY3 685 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 VWA7Q9Y334 891 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 IGLV3-10A0A075B6K4 115 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 INPPL1O15357 1258 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 PSMD3O43242 534 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 OR1I1O60431 355 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 SUPT7LO94864 414 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 LUC7L3O95232 432 aaKnown RBP14.85□□□□□ -0.03
SF1-211ENST00000448404 PRAMEF12O95522 483 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 FESP07332 822 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 NDST2P52849 883 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 THOP1P52888 689 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 FOXA1P55317 472 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 CDK18Q07002 472 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 ASPHQ12797 758 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 UGP2Q16851 508 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 MYLK4Q86YV6 388 aaPredicted RBP14.85□□□□□ -0.03
SF1-211ENST00000448404 TTPALQ9BTX7 342 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 MMADHCQ9H3L0 296 aaPredicted RBP14.85□□□□□ -0.03
SF1-211ENST00000448404 GPBP1L1Q9HC44 474 aaPredicted RBP14.85□□□□□ -0.03
SF1-211ENST00000448404 COL4A4P53420 1690 aaPredicted RBP14.85□□□□□ -0.03
SF1-211ENST00000448404 TMEM114B3SHH9 223 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 F5H5T6 163 aa14.85□□□□□ -0.03
SF1-211ENST00000448404 UBXN8O00124 270 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms