RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 TBC1D3IA0A087WXS9 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3EA0A087X179 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3KA0A087X1G2 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3FA6NER0 549 aaPredicted RBP14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3LB9A6J9 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 E7EVH7 732 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 NEMP1O14524 444 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 RNGTTO60942 597 aaKnown RBP14.09□□□□□ -0.15
CTSS-202ENST00000448301 SUN1O94901 812 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 PCDH8O95206 1070 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 PRKCGP05129 697 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 FGF1P05230 155 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 ALPIP09923 528 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3HP0C7X1 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 CTPS1P17812 591 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 ITIH2P19823 946 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 VIPR1P32241 457 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 VPS41P49754 854 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 FAM193AP78312 1265 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 BASP1P80723 227 aaKnown RBP14.09□□□□□ -0.15
CTSS-202ENST00000448301 RALGDSQ12967 914 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 GPS1Q13098 491 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 SLC1A5Q15758 541 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 SIRPB2Q5JXA9 342 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 PMS2CLQ68D20 193 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 KIAA0895LQ68EN5 471 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3GQ6DHY5 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3CQ6IPX1 549 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 NAPEPLDQ6IQ20 393 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 CEP68Q76N32 757 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 KDELC2Q7Z4H8 507 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TRIM69Q86WT6 500 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 JAMLQ86YT9 394 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBC1D3Q8IZP1 549 aaPredicted RBP14.09□□□□□ -0.15
CTSS-202ENST00000448301 ABCA7Q8IZY2 2146 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 DUSP15Q9H1R2 295 aaPredicted RBP14.09□□□□□ -0.15
CTSS-202ENST00000448301 C6orf106Q9H6K1 298 aaPredicted RBP14.09□□□□□ -0.15
CTSS-202ENST00000448301 B4GALT6Q9UBX8 382 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 HCN4Q9Y3Q4 1203 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 R4GN57 208 aa14.09□□□□□ -0.15
CTSS-202ENST00000448301 NPIPB15A6NHN6 443 aaPredicted RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 FAM47DPA6NHR8 397 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 TTI1O43156 1089 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 AGTP01019 485 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 TPSB2P20231 275 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 HNF1BP35680 557 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 MAGEA6P43360 314 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 CHRNA4P43681 627 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 LMAN1P49257 510 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 CCR5P51681 352 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 PPP2CBP62714 309 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 RPS21P63220 83 aaKnown RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 PPP2CAP67775 309 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 SIM2Q14190 667 aaPredicted RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 TPSAB1Q15661 275 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 ELF2Q15723 593 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 KCTD19Q17RG1 926 aaPredicted RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 PLK5Q496M5 336 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 DNTTIP2Q5QJE6 756 aaKnown RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 LPCAT2Q7L5N7 544 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 MAATS1Q7Z4T9 603 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 LINC00523Q86TU6 105 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 HORMAD1Q86X24 394 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 CEP112Q8N8E3 955 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 CXorf40AQ8TE69 158 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 FOXJ1Q92949 421 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 SRPK1Q96SB4 655 aaKnown RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 EPC1Q9H2F5 836 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 ARNT2Q9HBZ2 717 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 ASIC3Q9UHC3 531 aa14.08□□□□□ -0.15
CTSS-202ENST00000448301 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.08□□□□□ -0.15
CTSS-202ENST00000448301 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
CTSS-202ENST00000448301 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 A0A1W2PQU0 124 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 CTAGE15A4D2H0 777 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 PRR23AA6NEV1 266 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 FAM187AA6NFU0 413 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 METTL12A8MUP2 240 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 PSMD11O00231 422 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 LATO43561 262 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 USP12O75317 370 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 RHOBTB1O94844 696 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 HEXIM1O94992 359 aaKnown RBP14.07□□□□□ -0.16
CTSS-202ENST00000448301 IGHV4-34P06331 123 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 APRTP07741 180 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 CTAGE8P0CG41 777 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 ZNF30P17039 623 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 LHCGRP22888 699 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 CDK16Q00536 496 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 OLIG2Q13516 323 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 KCNJ11Q14654 390 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 DENND5AQ6IQ26 1287 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 CTAGE6Q86UF2 777 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 SLC41A1Q8IVJ1 513 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 CTAGE4Q8IX94 777 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 TMEFF1Q8IYR6 380 aa14.07□□□□□ -0.16
CTSS-202ENST00000448301 SLC25A41Q8N5S1 370 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms