RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 KIF20BQ96Q89 1820 aa4.36□□□□□ -1.71
VPS29-202ENST00000447578 ZMYM2Q9UBW7 1377 aa4.36□□□□□ -1.71
VPS29-202ENST00000447578 PLEKHG1Q9ULL1 1385 aa4.36□□□□□ -1.71
VPS29-202ENST00000447578 ADAMTS13Q76LX8 1427 aa4.36□□□□□ -1.71
VPS29-202ENST00000447578 FAM237BA0A1B0GVD1 139 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 LIPT2A6NK58 231 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 C16orf96A6NNT2 1141 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 CYSRT1A8MQ03 144 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 AGAP14A8MT82 685 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 RNF8O76064 485 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 OAZ2O95190 189 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 MBPP02686 304 aaPredicted RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 EIF2S1P05198 315 aaKnown RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 CHRM4P08173 479 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 CLTBP09497 229 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 PKMP14618 531 aaKnown RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 HOXB9P17482 250 aaPredicted RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 GSTM2P28161 218 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 NNMTP40261 264 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 PSMB10P40306 273 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 SLC37A1P57057 533 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 SHC2P98077 582 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 EFNB1P98172 346 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 TMEM115Q12893 351 aaPredicted RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 STK4Q13043 487 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 IL13RA2Q14627 380 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 CRYMQ14894 314 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 PLCB4Q15147 1175 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 SLC18A3Q16572 532 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 TWISTNBQ3B726 338 aaPredicted RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 C1QTNF12Q5T7M4 302 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 GPR139Q6DWJ6 353 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 NAPEPLDQ6IQ20 393 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 CDC73Q6P1J9 531 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 CYP20A1Q6UW02 462 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 C9orf47Q6ZRZ4 202 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 BRSK2Q8IWQ3 736 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 LAS2Q8IYD9 372 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 PLD5Q8N7P1 536 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 FRMD1Q8N878 549 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 IGFBPL1Q8WX77 278 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 RAB40AQ8WXH6 277 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 SMARCE1Q969G3 411 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 KLHL29Q96CT2 875 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 PERPQ96FX8 193 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 KLHL15Q96M94 604 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 MAK16Q9BXY0 300 aaKnown RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 RSPH9Q9H1X1 276 aaPredicted RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 CHMP4BQ9H444 224 aaKnown RBP4.35□□□□□ -1.71
VPS29-202ENST00000447578 SLC32A1Q9H598 525 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 SLC22A11Q9NSA0 550 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 ZBTB40Q9NUA8 1239 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 ACEP12821 1306 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 TTC21BQ7Z4L5 1316 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 PASKQ96RG2 1323 aa4.35□□□□□ -1.71
VPS29-202ENST00000447578 ERAL1O75616 437 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 RPN1P04843 607 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 ADRB2P07550 413 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 ALDOCP09972 364 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 ZNF853P0CG23 659 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 ATF7P17544 494 aaPredicted RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 TM4SF1P30408 202 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GCH1P30793 250 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 CPOXP36551 454 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 MTNR1AP48039 350 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 OAZ1P54368 228 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 PRAMEP78395 509 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 ID2Q02363 134 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 CFHR1Q03591 330 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GOLGA8DPQ0D2H9 430 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 CDC16Q13042 620 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GAB1Q13480 694 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 PRPF4BQ13523 1007 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 LARS2Q15031 903 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 CNGA3Q16281 694 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GXYLT1Q4G148 440 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 NAA16Q6N069 864 aaPredicted RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 TTI2Q6NXR4 508 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 TMEM81Q6P7N7 255 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GJB7Q6PEY0 223 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 KLHL35Q6PF15 583 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 RANBP10Q6VN20 620 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GALNT7Q86SF2 657 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 NKAIN3Q8N8D7 197 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 SMRP1Q8NCR6 262 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 C2CD4CQ8TF44 421 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 POMGNT1Q8WZA1 660 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 ARHGEF2Q92974 986 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 EDC3Q96F86 508 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 CMTM3Q96MX0 182 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 TTC14Q96N46 770 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 GPR78Q96P69 363 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 API5Q9BZZ5 524 aaKnown RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 SIL1Q9H173 461 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 ALDH8A1Q9H2A2 487 aaPredicted RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 KAT14Q9H8E8 782 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 FZD4Q9ULV1 537 aa4.34□□□□□ -1.71
VPS29-202ENST00000447578 HEMK1Q9Y5R4 338 aaPredicted RBP4.34□□□□□ -1.71
VPS29-202ENST00000447578 USP6P35125 1406 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms