RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 NFKB1P19838 968 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 RBL1P28749 1068 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 NUDT1P36639 197 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 SUOXP51687 545 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 EPHB1P54762 984 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 SKOR1P84550 965 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 WASHC5Q12768 1159 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 GALNT3Q14435 633 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 RPS6KA1Q15418 735 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 HLA-BQ31612 363 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 TMEM52BQ4KMG9 183 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 DPPA4Q7L190 304 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 KDELC2Q7Z4H8 507 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 CDKL3Q8IVW4 592 aaPredicted RBP11.98□□□□□ -0.49
RFC4-208ENST00000447345 TMEM145Q8NBT3 493 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 LPCAT1Q8NF37 534 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 TRIM58Q8NG06 486 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 SPATA22Q8NHS9 363 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 C1QTNF2Q9BXJ5 285 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 PCDH9Q9HC56 1237 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 TRMT1Q9NXH9 659 aaKnown RBP11.98□□□□□ -0.49
RFC4-208ENST00000447345 UBP1Q9NZI7 540 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 EFR3BQ9Y2G0 817 aa11.98□□□□□ -0.49
RFC4-208ENST00000447345 R3HDM2Q9Y2K5 976 aaKnown RBP11.98□□□□□ -0.49
RFC4-208ENST00000447345 POM121BA6NF01 834 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 NPIPB15A6NHN6 443 aaPredicted RBP11.97□□□□□ -0.49
RFC4-208ENST00000447345 A6NNZ2 444 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 HACD1B0YJ81 288 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 TLR4O00206 839 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 FPGTO14772 594 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 SLC30A4O14863 429 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 KCNN4O15554 427 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 MT-CYBP00156 380 aaPredicted RBP11.97□□□□□ -0.49
RFC4-208ENST00000447345 PCCBP05166 539 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 THEGLP0DJG4 465 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 RBP3P10745 1247 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 CA4P22748 312 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 LHCGRP22888 699 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 VIPR1P32241 457 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 IGFALSP35858 605 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 CTSKP43235 329 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 ID4P47928 161 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 LIMK1P53667 647 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 NXPH1P58417 271 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 XRCC4Q13426 336 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 ACOX1Q15067 660 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 IRF4Q15306 451 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 CNGA3Q16281 694 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 TEX44Q53QW1 395 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 DARS2Q6PI48 645 aaKnown RBP11.97□□□□□ -0.49
RFC4-208ENST00000447345 IL27RAQ6UWB1 636 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 USP45Q70EL2 814 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 TSPAN33Q86UF1 283 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 ZNF567Q8N184 647 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 OR13H1Q8NG92 308 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 ATG4AQ8WYN0 398 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 SKA1Q96BD8 255 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 IMP4Q96G21 291 aaKnown RBP11.97□□□□□ -0.49
RFC4-208ENST00000447345 KLHDC7BQ96G42 594 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 TEKT5Q96M29 485 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 ZDHHC5Q9C0B5 715 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 GLOD4Q9HC38 313 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 RSPH14Q9UHP6 348 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
RFC4-208ENST00000447345 CNOT1A5YKK6 2376 aaKnown RBP11.97□□□□□ -0.49
RFC4-208ENST00000447345 DNAH14Q0VDD8 3507 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 A0A1W2PQ67 120 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 DCDC2BA2VCK2 349 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 USP27XA6NNY8 438 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 ENC1O14682 589 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 ZSCAN12O43309 604 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 MTSS1O43312 755 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 FZD6O60353 706 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 PMPCBO75439 489 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 SLC4A1P02730 911 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 CYP2A6P11509 494 aaPredicted RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 CES1P23141 567 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 CXCR5P32302 372 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 CD68P34810 354 aaPredicted RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 KLF1Q13351 362 aaPredicted RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 ARHGEF7Q14155 803 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 LIPIQ6XZB0 460 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 KYAT3Q6YP21 454 aaKnown RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 Q6ZSR6 202 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 PID1Q7Z2X4 250 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 ZSCAN30Q86W11 494 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 SPATS2Q86XZ4 545 aaKnown RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 NDUFAF2Q8N183 169 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 SLC22A18ASQ8N1D0 253 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 TP53I13Q8NBR0 393 aaPredicted RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 PIH1D2Q8WWB5 315 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 KLF6Q99612 283 aaPredicted RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 C1QTNF7Q9BXJ2 289 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 TLR10Q9BXR5 811 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 SLC25A51Q9H1U9 297 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 CAAP1Q9H8G2 361 aa11.96□□□□□ -0.49
RFC4-208ENST00000447345 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
RFC4-208ENST00000447345 PYCARDQ9ULZ3 195 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms