RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 MFSD2AQ8NA29 543 aa24.09■■□□□ 1.45
C9orf3-207ENST00000445181 AGAP3Q96P47 875 aa24.09■■□□□ 1.45
C9orf3-207ENST00000445181 C1QTNF7Q9BXJ2 289 aa24.09■■□□□ 1.45
C9orf3-207ENST00000445181 H7C0C1 242 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 TLR4O00206 839 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 MAGEC1O60732 1142 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 PGLSO95336 258 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 MMP12P39900 470 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 ATP5OP48047 213 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 FGL2Q14314 439 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 IQCHQ86VS3 1027 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 TMEM145Q8NBT3 493 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 KLHDC7BQ96G42 594 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 HERPUD2Q9BSE4 406 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 SCNM1Q9BWG6 230 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 PHTF1Q9UMS5 762 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 PCDHGB2Q9Y5G2 931 aa24.08■■□□□ 1.45
C9orf3-207ENST00000445181 GOLGA6L9A6NEM1 432 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 A8MX80 341 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 HACD1B0YJ81 288 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 MTSS1O43312 755 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 CD86P42081 329 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 CTSKP43235 329 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 LIG3P49916 1009 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 EPHB1P54762 984 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 CLDN2P57739 230 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 OTUD4Q01804 1114 aaKnown RBP24.07■■□□□ 1.44
C9orf3-207ENST00000445181 NIPAL4Q0D2K0 466 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 OVGP1Q12889 678 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 GSE1Q14687 1217 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 FAM182AQ5T1J6 154 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 NDUFAF2Q8N183 169 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 CNTD1Q8N815 330 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 ARRDC2Q8TBH0 407 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 UBE2Q2Q8WVN8 375 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 ASB12Q8WXK4 309 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 QKIQ96PU8 341 aaKnown RBP eCLIP24.07■■□□□ 1.441e-6■■■■□ 19.6
C9orf3-207ENST00000445181 FERMT1Q9BQL6 677 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 GDF3Q9NR23 364 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 PCOLCE2Q9UKZ9 415 aa24.07■■□□□ 1.44
C9orf3-207ENST00000445181 CHD8Q9HCK8 2581 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 H0Y8X5 98 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 FPGTO14772 594 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 RAD51BO15315 384 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 HYAL3O43820 417 aaPredicted RBP24.06■■□□□ 1.44
C9orf3-207ENST00000445181 LZTS3O60299 673 aaPredicted RBP24.06■■□□□ 1.44
C9orf3-207ENST00000445181 CBFA2T3O75081 653 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 ELFN1P0C7U0 828 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 C6P13671 934 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 PTPN3P26045 913 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 NXPH1P58417 271 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 XRCC4Q13426 336 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 SUZ12Q15022 739 aaKnown RBP24.06■■□□□ 1.44
C9orf3-207ENST00000445181 NOMO1Q15155 1222 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 RPS6KA1Q15418 735 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 ST3GAL2Q16842 350 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 TEX44Q53QW1 395 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 DBX2Q6ZNG2 339 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 GCNT7Q6ZNI0 430 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 DPPA4Q7L190 304 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 ACTL9Q8TC94 416 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 HTR3CQ8WXA8 447 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 SPOCK2Q92563 424 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 LENG8Q96PV6 779 aaPredicted RBP24.06■■□□□ 1.44
C9orf3-207ENST00000445181 COQ6Q9Y2Z9 468 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 HS3ST3A1Q9Y663 406 aa24.06■■□□□ 1.44
C9orf3-207ENST00000445181 A6NNZ2 444 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 TRIM16O95361 564 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 THEGLP0DJG4 465 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 CYP2A6P11509 494 aaPredicted RBP24.05■■□□□ 1.44
C9orf3-207ENST00000445181 ZNF423Q2M1K9 1284 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 SEL1L2Q5TEA6 688 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 USP45Q70EL2 814 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 PTAR1Q7Z6K3 402 aaPredicted RBP24.05■■□□□ 1.44
C9orf3-207ENST00000445181 DENND6BQ8NEG7 585 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 TRIM58Q8NG06 486 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 FAM174AQ8TBP5 190 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 FAM118BQ9BPY3 351 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 TDRD1Q9BXT4 1180 aaKnown RBP24.05■■□□□ 1.44
C9orf3-207ENST00000445181 KLHL8Q9P2G9 620 aaPredicted RBP24.05■■□□□ 1.44
C9orf3-207ENST00000445181 B4GALT6Q9UBX8 382 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 CHKBQ9Y259 395 aa24.05■■□□□ 1.44
C9orf3-207ENST00000445181 FLRT2O43155 660 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 PDHA1P08559 390 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 CTPS1P17812 591 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 EIF3EP60228 445 aaKnown RBP24.04■■□□□ 1.44
C9orf3-207ENST00000445181 SKOR1P84550 965 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 RALGDSQ12967 914 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 MEI1Q5TIA1 1274 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 CDKL3Q8IVW4 592 aaPredicted RBP24.04■■□□□ 1.44
C9orf3-207ENST00000445181 CHCHD4Q8N4Q1 142 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 RHBDD1Q8TEB9 315 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 TEKT5Q96M29 485 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 RBM15Q96T37 977 aaKnown RBP eCLIP24.04■■□□□ 1.44
C9orf3-207ENST00000445181 SLC25A51Q9H1U9 297 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 GLOD4Q9HC38 313 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 PCDH9Q9HC56 1237 aa24.04■■□□□ 1.44
C9orf3-207ENST00000445181 POM121BA6NF01 834 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 DFNA5O60443 496 aa24.03■■□□□ 1.44
C9orf3-207ENST00000445181 MMP2P08253 660 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms