RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 NSMCE3Q96MG7 304 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 GPR78Q96P69 363 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 SORT1Q99523 831 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 C2orf49Q9BVC5 232 aaPredicted RBP18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 LRMDAQ9H2I8 198 aa18.94■□□□□ 0.62
SEMA3D-202ENST00000444867 CXorf51AA0A1B0GTR3 108 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 CCDC162PA2VCL2 907 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 TARM1B6A8C7 271 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 CD3EAPO15446 510 aaKnown RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 CCDC22O60826 627 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 LYPLA1O75608 230 aaPredicted RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 GOT2P00505 430 aaKnown RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 PRLP01236 227 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 ALOX15P16050 662 aaPredicted RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 ZNF140P52738 457 aaPredicted RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 UBE3AQ05086 875 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 CTC1Q2NKJ3 1217 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 HECTD2Q5U5R9 776 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 RETSATQ6NUM9 610 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 UBE2Q1Q7Z7E8 422 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 SDCCAG8Q86SQ7 713 aaPredicted RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 FSTL5Q8N475 847 aaPredicted RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 MRPL43Q8N983 215 aaKnown RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 OR4L1Q8NH43 312 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 ACDQ96AP0 544 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 MRPL57Q9BQC6 102 aaKnown RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 MRPL46Q9H2W6 279 aaKnown RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 CATSPERZQ9NTU4 200 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 HACD3Q9P035 362 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 CXXC1Q9P0U4 656 aaPredicted RBP18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 VPS51Q9UID3 782 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 LNPEPQ9UIQ6 1025 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 ARHGAP26Q9UNA1 814 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 VWA7Q9Y334 891 aa18.93■□□□□ 0.62
SEMA3D-202ENST00000444867 A0A1W2PRU2 124 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 C2orf71A6NGG8 1288 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 C2orf81A6NN90 581 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 SOBPA7XYQ1 873 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TRAFD1O14545 582 aaPredicted RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 AURKAO14965 403 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 KITP10721 976 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 MYL4P12829 197 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 CTNNB1P35222 781 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 HK2P52789 917 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 EPHA5P54756 1037 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 ERVFC1P60507 584 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 RHOAP61586 193 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 AP1S1P61966 158 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 FAM83EQ2M2I3 478 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 ZNF789Q5FWF6 425 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 RBM20Q5T481 1227 aaKnown RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 AGAP9Q5VTM2 703 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 FBXW10Q5XX13 1052 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 AFTPHQ6ULP2 937 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 GLT6D1Q7Z4J2 308 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 DDI1Q8WTU0 396 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 HERVK_113Q902F9 699 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 NXNL1Q96CM4 212 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 CDKN2AIPNLQ96HQ2 116 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TMEM237Q96Q45 408 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 RAB3IPQ96QF0 476 aaPredicted RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 CORO1BQ9BR76 489 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 INTS10Q9NVR2 710 aaKnown RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 MARCH4Q9P2E8 410 aaPredicted RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 MARCOQ9UEW3 520 aaPredicted RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 SPO11Q9Y5K1 396 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 SLC4A7Q9Y6M7 1214 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TK2O00142 265 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 LEFTY2O00292 366 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 FCHO1O14526 889 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TLL1O43897 1013 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 SNUPNO95149 360 aaKnown RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 HSPA4LO95757 839 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 SBK3P0C264 359 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 T-ENOLP0DO92 83 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TARSP26639 723 aaKnown RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TBCCQ15814 346 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 TYSND1Q2T9J0 566 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 KLC3Q6P597 504 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 CYB5D1Q6P9G0 228 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 LINGO4Q6UY18 593 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 BBS7Q8IWZ6 715 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 LPCAT1Q8NF37 534 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 OR13C4Q8NGS5 318 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 OLFM1Q99784 485 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 POPDC3Q9HBV1 291 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 DNAJC28Q9NX36 388 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 KIAA1522Q9P206 1035 aaPredicted RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 CPSF2Q9P2I0 782 aaKnown RBP18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 SORCS3Q9UPU3 1222 aa18.92■□□□□ 0.62
SEMA3D-202ENST00000444867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 ANKRD66B4E2M5 251 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 SCAMP3O14828 347 aaKnown RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 CCL16O15467 120 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 CYBBP04839 570 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 LTA4HP09960 611 aaKnown RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 LPOP22079 712 aaPredicted RBP18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 MAPK8P45983 427 aa18.91■□□□□ 0.62
SEMA3D-202ENST00000444867 CSNK1DP48730 415 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms