RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 USP17L3A6NCW0 530 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 USP17L4A6NCW7 530 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SPDYE2BA6NHP3 402 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SUPT3HB4E1H0 165 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 POLRMTO00411 1230 aaKnown RBP5.17□□□□□ -1.58
SCN11A-202ENST00000444237 POLR1CO15160 346 aaPredicted RBP5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SLC16A4O15374 487 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 TADA2AO75478 443 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 PGLSO95336 258 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 HLA-DRAP01903 254 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 FUCA1P04066 466 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SPDYE6P0CI01 402 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 PEPDP12955 493 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 XRCC1P18887 633 aaPredicted RBP5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CYP3A5P20815 502 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 MYL9P24844 172 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 STAT3P40763 770 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 RHDQ02161 417 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 PCDH1Q08174 1060 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CCNIQ14094 377 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 GNA13Q14344 377 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 DSC3Q14574 896 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 EMC2Q15006 297 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SF3B4Q15427 424 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SSX2Q16385 188 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 ESCO2Q56NI9 601 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 MFSD7Q6UXD7 560 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 USP17L1Q7RTZ2 530 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 ERMP1Q7Z2K6 904 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 UNC5BQ8IZJ1 945 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 LZTR1Q8N653 840 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 ANKRD52Q8NB46 1076 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 LPCAT1Q8NF37 534 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 TRPM4Q8TD43 1214 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 EPS8L1Q8TE68 723 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 DPF3Q92784 378 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CCDC120Q96HB5 630 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CCDC17Q96LX7 622 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SLC30A2Q9BRI3 323 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CHCHD6Q9BRQ6 235 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 SPATA9Q9BWV2 254 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CASS4Q9NQ75 786 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CLN6Q9NWW5 311 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 AKAP7Q9P0M2 348 aaPredicted RBP5.17□□□□□ -1.58
SCN11A-202ENST00000444237 CDC14AQ9UNH5 594 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 TBC1D30Q9Y2I9 924 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 PCDHA11Q9Y5I1 949 aa5.17□□□□□ -1.58
SCN11A-202ENST00000444237 A0A088AWK7 358 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 EI24O14681 340 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FOXD2O60548 495 aaPredicted RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 SLITRK5O94991 958 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 PRAMEF1O95521 474 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 SERPINF2P08697 491 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 ZSCAN5DPP0CG00 497 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 LBPP18428 481 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 CD72P21854 359 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 PTPN7P35236 360 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 ALDH7A1P49419 539 aaKnown RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 RC3H1Q5TC82 1133 aaKnown RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 AGAP6Q5VW22 663 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FOXB2Q5VYV0 432 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 CASP12Q6UXS9 341 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 ATG9AQ7Z3C6 839 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FIBCD1Q8N539 461 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 MEIOBQ8N635 442 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 MCPH1Q8NEM0 835 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 OR6P1Q8NGX9 317 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 TFB1MQ8WVM0 346 aaKnown RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 MAGEB10Q96LZ2 347 aaPredicted RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 AGAP4Q96P64 663 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 CAMKK2Q96RR4 588 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 GAD1Q99259 594 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 MED10Q9BTT4 135 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FAM83DQ9H4H8 585 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 STAP1Q9ULZ2 295 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 UBQLN1Q9UMX0 589 aaKnown RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 RGPD8O14715 1765 aaPredicted RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FABP12A6NFH5 140 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 UBE2Q2LH0YL09 131 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 APOC4-APOC2K7ER74 178 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 M0R233 179 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 YKT6O15498 198 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 BBOX1O75936 387 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 LSM8O95777 96 aaKnown RBP5.16□□□□□ -1.58
SCN11A-202ENST00000444237 APOC1P02654 83 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 APOC2P02655 101 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 GM2AP17900 193 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 GPD1P21695 349 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 OR3A3P47888 321 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 NFIAQ12857 509 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 TOMM20Q15388 145 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FBXO43Q4G163 708 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 ANKRD26P1Q6NSI1 321 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 SPPL2CQ8IUH8 684 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FAM126BQ8IXS8 530 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 CHPFQ8IZ52 775 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 SYNE4Q8N205 404 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 UXS1Q8NBZ7 420 aa5.16□□□□□ -1.58
SCN11A-202ENST00000444237 FBXO30Q8TB52 745 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms