RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 TSEN2Q8NCE0 465 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 SNRNP27Q8WVK2 155 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 KCNE4Q8WWG9 221 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 SLC39A7Q92504 469 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 LIN37Q96GY3 246 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 CELF6Q96J87 481 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 KCTD15Q96SI1 283 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 RBM15Q96T37 977 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■□□ 15.5
CTDSP1-204ENST00000443891 CCDC3Q9BQI4 270 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 CAAP1Q9H8G2 361 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 GPATCH2LQ9NWQ4 482 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 KLQ9UEF7 1012 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 CNOT8Q9UFF9 292 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 PCSK1NQ9UHG2 260 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 SSUH2Q9Y2M2 353 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 BZW2Q9Y6E2 419 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 ASXL3Q9C0F0 2248 aa16.42■□□□□ 0.22
CTDSP1-204ENST00000443891 CCDC187A0A096LP49 1063 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 CACNB4O00305 520 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 LRCH4O75427 683 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 PNLIPP16233 465 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 TRIM23P36406 574 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 ARL4AP40617 200 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 SKOR1P84550 965 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 DPYSL2Q16555 572 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 CA9Q16790 459 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 TSR1Q2NL82 804 aaKnown RBP16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 ANO6Q4KMQ2 910 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 PERM1Q5SV97 790 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 LIPIQ6XZB0 460 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 DPPA4Q7L190 304 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 ZNF571Q7Z3V5 609 aaPredicted RBP16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 BBS5Q8N3I7 341 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 ISCUQ9H1K1 167 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 SATB2Q9UPW6 733 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 COQ6Q9Y2Z9 468 aa16.41■□□□□ 0.22
CTDSP1-204ENST00000443891 PTPRQQ9UMZ3 2332 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 A0A1B0GTH6 734 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 H3BRJ5 948 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 DFFAO00273 331 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 TRAFD1O14545 582 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 SOCS5O75159 536 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 RECQL5O94762 991 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 ELFN1P0C7U0 828 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 DPYSQ14117 519 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 PIGHQ14442 188 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 LBRQ14739 615 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 PPP6R3Q5H9R7 873 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 C3orf38Q5JPI3 329 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 OGFOD3Q6PK18 319 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 CYP4V2Q6ZWL3 525 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 CLEC14AQ86T13 490 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 LRRC49Q8IUZ0 686 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 NETO2Q8NC67 525 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 OR56A4Q8NGH8 313 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 TSACCQ96A04 125 aaPredicted RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 ZNF653Q96CK0 615 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 ATXN7L3BQ96GX2 97 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 PEBP4Q96S96 227 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 CWC15Q9P013 229 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 GPR34Q9UPC5 381 aa16.4■□□□□ 0.22
CTDSP1-204ENST00000443891 CDRT15L2A8MXV6 281 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.213e-13■■■□□ 17.9
CTDSP1-204ENST00000443891 HTRA2O43464 458 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 ITGA2BP08514 1039 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 SERPINB6P35237 376 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 RGRP47804 291 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 SCNN1BP51168 640 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 CXADRP78310 365 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 RALGDSQ12967 914 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 ZSWIM9Q86XI8 627 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 PAF1Q8N7H5 531 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 GPR156Q8NFN8 814 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 PCDH19Q8TAB3 1148 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 SYN2Q92777 582 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 PRR11Q96HE9 360 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 TMEM74Q96NL1 305 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 STRADBQ9C0K7 418 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 GULP1Q9UBP9 304 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 APPL1Q9UKG1 709 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 OR1A2Q9Y585 309 aa16.39■□□□□ 0.21
CTDSP1-204ENST00000443891 PSMD11O00231 422 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 PCCBP05166 539 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 GLB1P16278 677 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 CCKBRP32239 447 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 ZNF165P49910 485 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 PEX6Q13608 980 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 ZNF235Q14590 738 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 TMCO3Q6UWJ1 677 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 NPWQ8N729 165 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 KYQ8NBH2 561 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 NSMCE1Q8WV22 266 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 TEKT4Q8WW24 435 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 TMEM159Q96B96 161 aa16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 GFM1Q96RP9 751 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-204ENST00000443891 NUDCD1Q96RS6 583 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms