RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 HSPH1Q92598 858 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 PEBP4Q96S96 227 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 KCTD15Q96SI1 283 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 CINPQ9BW66 212 aaPredicted RBP8.84□□□□□ -0.99
USP6NL-203ENST00000443016 SLC39A8Q9C0K1 460 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 LACRTQ9GZZ8 138 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 LRRC19Q9H756 370 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 UCKL1Q9NWZ5 548 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 MFHAS1Q9Y4C4 1052 aa8.84□□□□□ -0.99
USP6NL-203ENST00000443016 SPTY2D1-AS1A0A0U1RR47 76 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 AREL1O15033 823 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 INSIG1O15503 277 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 PRAMEF11O60813 436 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 MMP20O60882 483 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 PIAS2O75928 621 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 MTA2O94776 668 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ARHGAP25P42331 645 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ACADVLP49748 655 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 ELP6Q0PNE2 266 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 PIGHQ14442 188 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 ACAP1Q15027 740 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 CYTH1Q15438 398 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 UGP2Q16851 508 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 BOLA3Q53S33 107 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ERAP2Q6P179 960 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 SLC35G2Q8TBE7 412 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 IFT43Q96FT9 208 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 CPEB1Q9BZB8 566 aaKnown RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 SUV39H2Q9H5I1 410 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.83□□□□□ -1
USP6NL-203ENST00000443016 ANAPC7Q9UJX3 599 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 DNMT3AQ9Y6K1 912 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 TDRD6O60522 2096 aaKnown RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 RCCD1A6NED2 376 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 USP27XA6NNY8 438 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 H3BRJ5 948 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 TRIM38O00635 465 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 NEBLO76041 1014 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 CD53P19397 219 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ITIH2P19823 946 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 SERPINA4P29622 427 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 PCK1P35558 622 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 CYP4F3Q08477 520 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ILKQ13418 452 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 PTK2BQ14289 1009 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 HES3Q5TGS1 186 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 C17orf53Q8N3J3 647 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 LZTR1Q8N653 840 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 PDCD7Q8N8D1 485 aaKnown RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 TSEN2Q8NCE0 465 aaKnown RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 DENND6BQ8NEG7 585 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 OR4C6Q8NH72 309 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 LENG8Q96PV6 779 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 KLF6Q99612 283 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 DUSP23Q9BVJ7 150 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 ATP13A3Q9H7F0 1226 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 CWC15Q9P013 229 aaKnown RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 DKK3Q9UBP4 350 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 LHX3Q9UBR4 397 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 TP53BP1Q12888 1972 aaPredicted RBP8.83□□□□□ -1
USP6NL-203ENST00000443016 CHD5Q8TDI0 1954 aa8.83□□□□□ -1
USP6NL-203ENST00000443016 MYO1FO00160 1098 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 TIMP2P16035 220 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 JUNDP17535 347 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 CDKN1CP49918 316 aaPredicted RBP8.82□□□□□ -1
USP6NL-203ENST00000443016 SCNN1BP51168 640 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 SUOXP51687 545 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 CLDN6P56747 220 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 FOXK1P85037 733 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 BCL2L1Q07817 233 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 FZD2Q14332 565 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 C11orf63Q6NUN7 778 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 BRAT1Q6PJG6 821 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 TMCO3Q6UWJ1 677 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 KANSL1Q7Z3B3 1105 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 JAMLQ86YT9 394 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 CAMK1DQ8IU85 385 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 ASB12Q8WXK4 309 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 ZNF641Q96N77 438 aaPredicted RBP8.82□□□□□ -1
USP6NL-203ENST00000443016 IL12RB2Q99665 862 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 ABCG4Q9H172 646 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 PDFQ9HBH1 243 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 EVA1BQ9NVM1 165 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 TRIM10Q9UDY6 481 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 IP6K2Q9UHH9 426 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 TFR2Q9UP52 801 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 ATRXP46100 2492 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 SCAMP1O15126 338 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 MAP3K7O43318 606 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 CSF2P04141 144 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 NME1P15531 152 aaKnown RBP8.82□□□□□ -1
USP6NL-203ENST00000443016 IL1R2P27930 398 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 HCAR3P49019 387 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 GNG11P61952 73 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 TARDBPQ13148 414 aaKnown RBP eCLIP8.82□□□□□ -16e-10■■■□□ 14.9
USP6NL-203ENST00000443016 ZNF235Q14590 738 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 RFTN1Q14699 578 aaPredicted RBP8.82□□□□□ -1
USP6NL-203ENST00000443016 LRRC14Q15048 493 aa8.82□□□□□ -1
USP6NL-203ENST00000443016 PROX2Q3B8N5 592 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms