RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LRRC38Q5VT99 294 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 DENND2CQ68D51 928 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 TMPRSS7Q7RTY8 843 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 RFX6Q8HWS3 928 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 CCDC170Q8IYT3 715 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 PHACTR4Q8IZ21 702 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 GALNT15Q8N3T1 639 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 TEX26Q8N6G2 289 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 MAML1Q92585 1016 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 RNF25Q96BH1 459 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 MAK16Q9BXY0 300 aaKnown RBP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 TCEAL2Q9H3H9 227 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 GOLPH3Q9H4A6 298 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 LUC7LQ9NQ29 371 aaKnown RBP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 RBM22Q9NW64 420 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 NLGN3Q9NZ94 848 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 RAI2Q9Y5P3 530 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 TRPM6Q9BX84 2022 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 AKAP13Q12802 2813 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 SOWAHDA6NJG2 315 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 SCAMP1O15126 338 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 AQP9O43315 295 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 PGLSO95336 258 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 NFKBIAP25963 317 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 VIPR1P32241 457 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 DSC2Q02487 901 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 INPP5AQ14642 412 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 TCEA2Q15560 299 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 FAXCQ5TGI0 409 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 LIPIQ6XZB0 460 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 CCNI2Q6ZMN8 369 aaPredicted RBP21.14■□□□□ 0.97
CDKN3-204ENST00000442975 USP45Q70EL2 814 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 GAS2L3Q86XJ1 694 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 CCDC13Q8IYE1 715 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 PLD5Q8N7P1 536 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 SLC13A1Q9BZW2 595 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 DDX56Q9NY93 547 aaKnown RBP21.14■□□□□ 0.97
CDKN3-204ENST00000442975 PCDHA13Q9Y5I0 950 aa21.14■□□□□ 0.97
CDKN3-204ENST00000442975 DOCK9Q9BZ29 2069 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 CFAP69A5D8W1 941 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 FAM221BA6H8Z2 402 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 C3orf70A6NLC5 250 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-204ENST00000442975 K7ESM1 405 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 KCNK1O00180 336 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 TOR1BO14657 336 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 IPO7O95373 1038 aaKnown RBP21.13■□□□□ 0.97
CDKN3-204ENST00000442975 HLA-DQB2P05538 268 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 MYF5P13349 255 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 CCNB1P14635 433 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 CTPS1P17812 591 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 CCNCP24863 283 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 HTR1BP28222 390 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 PPARDQ03181 441 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 SLC10A2Q12908 348 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-204ENST00000442975 MTM1Q13496 603 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 NFATC4Q14934 902 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 TCEAL1Q15170 157 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 SMAD1Q15797 465 aaKnown RBP21.13■□□□□ 0.97
CDKN3-204ENST00000442975 CNGA3Q16281 694 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 DEFB133Q30KQ1 61 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 PRRT3Q5FWE3 981 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 PLA2G15Q8NCC3 412 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 BTN2A2Q8WVV5 523 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 HDAC11Q96DB2 347 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 TSGA13Q96PP4 275 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 PANX2Q96RD6 677 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 LGMNQ99538 433 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 LRRC61Q9BV99 259 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 SPASTQ9UBP0 616 aa21.13■□□□□ 0.97
CDKN3-204ENST00000442975 PNMA8BQ9ULN7 279 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-204ENST00000442975 COL5A1P20908 1838 aaPredicted RBP21.13■□□□□ 0.97
CDKN3-204ENST00000442975 USP24Q9UPU5 2620 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 TMEM8BA6NDV4 472 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 NPIPB15A6NHN6 443 aaPredicted RBP21.12■□□□□ 0.97
CDKN3-204ENST00000442975 ZNF487B1APH4 448 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 C1SP09871 688 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 GIMD1P0DJR0 217 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 CYP2A6P11509 494 aaPredicted RBP21.12■□□□□ 0.97
CDKN3-204ENST00000442975 EPHB1P54762 984 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 C1orf61Q13536 156 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 SLC9A4Q6AI14 798 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 ENPP7Q6UWV6 458 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 NPNTQ6UXI9 565 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 RD3Q7Z3Z2 195 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 HID1Q8IV36 788 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 SPOCK2Q92563 424 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 FATE1Q969F0 183 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 NUS1Q96E22 293 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 APOLD1Q96LR9 279 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 APOOQ9BUR5 198 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 DUSP23Q9BVJ7 150 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 KLQ9UEF7 1012 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 PHTF1Q9UMS5 762 aa21.12■□□□□ 0.97
CDKN3-204ENST00000442975 GOLGA6CA6NDK9 693 aa21.11■□□□□ 0.97
CDKN3-204ENST00000442975 GOLGA6BA6NDN3 693 aa21.11■□□□□ 0.97
CDKN3-204ENST00000442975 CACNB4O00305 520 aaPredicted RBP21.11■□□□□ 0.97
CDKN3-204ENST00000442975 PSTPIP1O43586 416 aa21.11■□□□□ 0.97
CDKN3-204ENST00000442975 HEXIM1O94992 359 aaKnown RBP21.11■□□□□ 0.97
CDKN3-204ENST00000442975 LCA5LO95447 670 aa21.11■□□□□ 0.97
CDKN3-204ENST00000442975 JCHAINP01591 159 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms