RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 LRRN4Q8WUT4 740 aa22.23■■□□□ 1.15
HDLBP-220ENST00000442730 PANX2Q96RD6 677 aa22.23■■□□□ 1.15
HDLBP-220ENST00000442730 POLR1EQ9GZS1 481 aaKnown RBP22.23■■□□□ 1.15
HDLBP-220ENST00000442730 PTPRBP23467 1997 aa22.23■■□□□ 1.15
HDLBP-220ENST00000442730 CACNA1BQ00975 2339 aa22.23■■□□□ 1.15
HDLBP-220ENST00000442730 SCAMP1O15126 338 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 NEBLO76041 1014 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 RECQL5O94762 991 aaPredicted RBP22.22■■□□□ 1.15
HDLBP-220ENST00000442730 PGLSO95336 258 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 PCCBP05166 539 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 C1SP09871 688 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 JUNDP17535 347 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 COMTP21964 271 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 FECHP22830 423 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 CCNCP24863 283 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 SLC9A4Q6AI14 798 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 RHOT1Q8IXI2 618 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 CCDC170Q8IYT3 715 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 RBFAQ8N0V3 343 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 KDF1Q8NAX2 398 aaPredicted RBP22.22■■□□□ 1.15
HDLBP-220ENST00000442730 HDAC11Q96DB2 347 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 SEMA3CQ99985 751 aa22.22■■□□□ 1.15
HDLBP-220ENST00000442730 TCEAL2Q9H3H9 227 aaPredicted RBP22.22■■□□□ 1.15
HDLBP-220ENST00000442730 TMEM8BA6NDV4 472 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 NEMP2A6NFY4 417 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 A8MX80 341 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 SPOPO43791 374 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 ACP1P24666 158 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 PEX5P50542 639 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 MTM1Q13496 603 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 INPP5AQ14642 412 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 HS1BP3Q53T59 392 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 MARCH9Q86YJ5 346 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 PHACTR4Q8IZ21 702 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 GALNT15Q8N3T1 639 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 PLA2G15Q8NCC3 412 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 ZNF830Q96NB3 372 aaPredicted RBP22.21■■□□□ 1.15
HDLBP-220ENST00000442730 MCCC1Q96RQ3 725 aaPredicted RBP22.21■■□□□ 1.15
HDLBP-220ENST00000442730 RBM22Q9NW64 420 aaKnown RBP eCLIP22.21■■□□□ 1.15
HDLBP-220ENST00000442730 APOBEC3BQ9UH17 382 aaKnown RBP22.21■■□□□ 1.15
HDLBP-220ENST00000442730 AMACRQ9UHK6 382 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 TFR2Q9UP52 801 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 OR1A2Q9Y585 309 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 PCDHA13Q9Y5I0 950 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 RAI2Q9Y5P3 530 aa22.21■■□□□ 1.15
HDLBP-220ENST00000442730 ZZEF1O43149 2961 aa22.2■■□□□ 1.15
HDLBP-220ENST00000442730 K7ESM1 405 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 AQP9O43315 295 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 HLA-DQB2P05538 268 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 ALPPL2P10696 532 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 CDK4P11802 303 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 CCNB1P14635 433 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 LHCGRP22888 699 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 CDC25BP30305 580 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 VIPR1P32241 457 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 PPIDQ08752 370 aaKnown RBP22.2■■□□□ 1.14
HDLBP-220ENST00000442730 ILKQ13418 452 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 IHHQ14623 411 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 NFATC4Q14934 902 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 SPA17Q15506 151 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 CNGA3Q16281 694 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 ARMC12Q5T9G4 340 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 CCDC13Q8IYE1 715 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.2■■□□□ 1.14
HDLBP-220ENST00000442730 BTN2A2Q8WVV5 523 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 TBATAQ96M53 351 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 COQ10AQ96MF6 247 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 LGMNQ99538 433 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 LRRC61Q9BV99 259 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 GOLPH3Q9H4A6 298 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 DDX56Q9NY93 547 aaKnown RBP22.2■■□□□ 1.14
HDLBP-220ENST00000442730 PHTF1Q9UMS5 762 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 CSNK1G3Q9Y6M4 447 aa22.2■■□□□ 1.14
HDLBP-220ENST00000442730 PLXNB3Q9ULL4 1909 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 LY6G6EA0A0G2JKS1 128 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 FAM149AA5PLN7 773 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 NPIPB15A6NHN6 443 aaPredicted RBP22.19■■□□□ 1.14
HDLBP-220ENST00000442730 SOWAHDA6NJG2 315 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 APOL1O14791 398 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 FZD6O60353 706 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 HEXIM1O94992 359 aaKnown RBP22.19■■□□□ 1.14
HDLBP-220ENST00000442730 TNNT1P13805 278 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 CYLC1P35663 651 aaPredicted RBP22.19■■□□□ 1.14
HDLBP-220ENST00000442730 NOP2P46087 812 aaKnown RBP22.19■■□□□ 1.14
HDLBP-220ENST00000442730 CLDN6P56747 220 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 DSC2Q02487 901 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 ITKQ08881 620 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 ACOX1Q15067 660 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 FAM181AQ8N9Y4 354 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 CCNYQ8ND76 341 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 ARRDC2Q8TBH0 407 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 LMX1AQ8TE12 382 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 ZCCHC14Q8WYQ9 949 aaKnown RBP22.19■■□□□ 1.14
HDLBP-220ENST00000442730 RNF25Q96BH1 459 aaPredicted RBP22.19■■□□□ 1.14
HDLBP-220ENST00000442730 APOLD1Q96LR9 279 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 OLFM3Q96PB7 478 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 APOOQ9BUR5 198 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 DUSP23Q9BVJ7 150 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 SPASTQ9UBP0 616 aa22.19■■□□□ 1.14
HDLBP-220ENST00000442730 TTLL3Q9Y4R7 772 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms