RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 MUSKO15146 869 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 TRIM13O60858 407 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 HSPA4LO95757 839 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 CA3P07451 260 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ITGALP20701 1170 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 XPAP23025 273 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 TTPAP49638 278 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 MPP1Q00013 466 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 CTBP1Q13363 440 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 ZRSR2Q15696 482 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 ACCSLQ4AC99 568 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 LACTB2Q53H82 288 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 ZDHHC20Q5W0Z9 365 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 UGT3A1Q6NUS8 523 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 CERS6Q6ZMG9 384 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 OTOAQ7RTW8 1153 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 GRASPQ7Z6J2 395 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 CMC1Q7Z7K0 106 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 OR2AP1Q8NGE2 309 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 BHMTQ93088 406 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 TRIB3Q96RU7 358 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 SPHK2Q9NRA0 654 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 FBXO6Q9NRD1 293 aaPredicted RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 SLC17A6Q9P2U8 582 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 TMCO1Q9UM00 188 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 RUVBL2Q9Y230 463 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 APOBEC2Q9Y235 224 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 FCF1Q9Y324 198 aaKnown RBP6.05□□□□□ -1.44
VPS50-205ENST00000441602 OR51B4Q9Y5P0 310 aa6.05□□□□□ -1.44
VPS50-205ENST00000441602 CCDC189A1A4V9 331 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CCDC162PA2VCL2 907 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ANKRD66B4E2M5 251 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 NEDD8-MDP1E9PL57 170 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GOLGA8TH3BQL2 631 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SCAMP3O14828 347 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 LDB2O43679 373 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GREM1O60565 184 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CCDC22O60826 627 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SMIM24O75264 130 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 VPS26AO75436 327 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 RFPL2O75678 378 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PGLSO95336 258 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 POP4O95707 220 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 GOT2P00505 430 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 PENKP01210 267 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 AHSGP02765 367 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 LTA4HP09960 611 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 GLDCP23378 1020 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SERPINB5P36952 375 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CORO7P57737 925 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 NAA20P61599 178 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 POLR2LP62875 67 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 BST1Q10588 318 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PDAP1Q13442 181 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 PREPLQ4J6C6 727 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 HECTD2Q5U5R9 776 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 C22orf39Q6P5X5 142 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 C6orf89Q6UWU4 347 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 USP45Q70EL2 814 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SLC22A9Q8IVM8 553 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 AHI1Q8N157 1196 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CDKN2AIPNLQ96HQ2 116 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 TBATAQ96M53 351 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 LRRC37BQ96QE4 947 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 MRPL57Q9BQC6 102 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 MRPL46Q9H2W6 279 aaKnown RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 MAGEE1Q9HCI5 957 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 NPHS2Q9NP85 383 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 HCFC1R1Q9NWW0 138 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 KCNK4Q9NYG8 393 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 IL1RAPL1Q9NZN1 696 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 MARK1Q9P0L2 795 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 COPG2Q9UBF2 871 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 APPL1Q9UKG1 709 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 VWA7Q9Y334 891 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZNF711Q9Y462 761 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 KIAA1671Q9BY89 1806 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 UBA6A0AVT1 1052 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 HMX2A2RU54 273 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CFAP73A6NFT4 308 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SLCO1B7G3V0H7 640 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 H3BMM5 538 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 RHOBTB1O94844 696 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 KLHL2O95198 593 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SLC4A1P02730 911 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CYP2A6P11509 494 aaPredicted RBP6.04□□□□□ -1.44
VPS50-205ENST00000441602 TRAF2Q12933 501 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 PDGFRLQ15198 375 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZNF77Q15935 545 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 DUSP6Q16828 381 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CARD16Q5EG05 197 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZRANB3Q5FWF4 1079 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 SPDYAQ5MJ70 313 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 GRAMD4Q6IC98 578 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 C16orf46Q6P387 395 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 ZYG11AQ6WRX3 759 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 NUDT18Q6ZVK8 323 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 CILP2Q8IUL8 1156 aa6.04□□□□□ -1.44
VPS50-205ENST00000441602 DENND6AQ8IWF6 608 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms