RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SNAP91O60641 907 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 SOCS5O75159 536 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 GJB3O75712 270 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 GOT2P00505 430 aaKnown RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 ALOX15P16050 662 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 SAT1P21673 171 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 MZF1P28698 734 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 SERPINB5P36952 375 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 AVPR1AP37288 418 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 CSNK1DP48730 415 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 ARSDP51689 593 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 TAS2R39P59534 338 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 ITGA9Q13797 1035 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 FAM83EQ2M2I3 478 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 AARS2Q5JTZ9 985 aaKnown RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 HECTD2Q5U5R9 776 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 PDE12Q6L8Q7 609 aaKnown RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 PTAR1Q7Z6K3 402 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 SDCCAG8Q86SQ7 713 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 BBS7Q8IWZ6 715 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 OR6Y1Q8NGX8 325 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 SHKBP1Q8TBC3 707 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 KCTD4Q8WVF5 259 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 STON2Q8WXE9 905 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 KLHL29Q96CT2 875 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 CCDC126Q96EE4 140 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 ALG14Q96F25 216 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 RAB3IPQ96QF0 476 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 OMDQ99983 421 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 C19orf43Q9BQ61 176 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 MRPL57Q9BQC6 102 aaKnown RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 MAN1C1Q9NR34 630 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 DNAJC28Q9NX36 388 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 CXXC1Q9P0U4 656 aaPredicted RBP13.22□□□□□ -0.29
CPSF4-206ENST00000441580 DNAJC16Q9Y2G8 782 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
CPSF4-206ENST00000441580 ZNF106Q9H2Y7 1883 aaKnown RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 TK2O00142 265 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 CD3EAPO15446 510 aaKnown RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 CCDC22O60826 627 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 HSPA4LO95757 839 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 IGSF6O95976 241 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 RB1P06400 928 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 F7P08709 466 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 LTA4HP09960 611 aaKnown RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 TCF3P15923 654 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 LPOP22079 712 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 FDXRP22570 491 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 STC1P52823 247 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 SLC20A2Q08357 652 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 TRAF2Q12933 501 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 USP4Q13107 963 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 KRT72Q14CN4 511 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 TTC31Q49AM3 519 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 FSCBQ5H9T9 825 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 RBM20Q5T481 1227 aaKnown RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 GPR158Q5T848 1215 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 CNSTQ6PJW8 725 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 ACVR1CQ8NER5 493 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 OR4L1Q8NH43 312 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 FIBINQ8TAL6 211 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 POF1BQ8WVV4 589 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 SAMD11Q96NU1 681 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 TCF12Q99081 682 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 KCNK13Q9HB14 408 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 SLC40A1Q9NP59 571 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 POLR3BQ9NW08 1133 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-206ENST00000441580 OXSMQ9NWU1 459 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 HEY2Q9UBP5 337 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 SORCS3Q9UPU3 1222 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 ACTL7AQ9Y615 435 aa13.21□□□□□ -0.29
CPSF4-206ENST00000441580 CCDC162PA2VCL2 907 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 LINC01553A4QN01 128 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 F8W8V4 182 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 CD160O95971 181 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 S1PR4O95977 384 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 RBP1P09455 135 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 NQO1P15559 274 aaKnown RBP13.2□□□□□ -0.3
CPSF4-206ENST00000441580 PTPN2P17706 415 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SERPINB3P29508 390 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 PMLP29590 882 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 SUOXP51687 545 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 PLK1P53350 603 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 AQP5P55064 265 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 ERVFC1P60507 584 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 C1QTNF8P60827 252 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 ZXDBP98169 803 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 LMAN2Q12907 356 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 RCN2Q14257 317 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 PLEKHG6Q3KR16 790 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 TECRLQ5HYJ1 363 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 ARMC12Q5T9G4 340 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 CES4AQ5XG92 561 aa13.2□□□□□ -0.3
CPSF4-206ENST00000441580 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms