RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 FOSL2P15408 326 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 SKIDA1Q1XH10 827 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 NLRP9Q7RTR0 991 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 TTC30BQ8N4P2 665 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 PEX13Q92968 403 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 HLA-CQ95604 372 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 LIMD1Q9UGP4 676 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 GGT7Q9UJ14 662 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 TICRRQ7Z2Z1 1910 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 GOLGA8TH3BQL2 631 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 CTSLP07711 333 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 ZNF140P52738 457 aaPredicted RBP28.06■■■□□ 2.08
CGREF1-207ENST00000440612 NAB1Q13506 487 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 ZNF234Q14588 700 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 SMAD2Q15796 467 aaKnown RBP28.06■■■□□ 2.08
CGREF1-207ENST00000440612 PDPK2PQ6A1A2 396 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 SLC44A3Q8N4M1 653 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 EZH1Q92800 747 aaPredicted RBP28.06■■■□□ 2.08
CGREF1-207ENST00000440612 ZNF641Q96N77 438 aaPredicted RBP28.06■■■□□ 2.08
CGREF1-207ENST00000440612 MCMBPQ9BTE3 642 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 TRPV5Q9NQA5 729 aa28.06■■■□□ 2.08
CGREF1-207ENST00000440612 A0A0J9YYE9 177 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 A0A0U1RQS6 177 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 BUD23O43709 281 aaKnown RBP28.05■■■□□ 2.08
CGREF1-207ENST00000440612 TRBC1P01850 177 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 INHBAP08476 426 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 ALPIP09923 528 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 CHRM1P11229 460 aaPredicted RBP28.05■■■□□ 2.08
CGREF1-207ENST00000440612 ABL2P42684 1182 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 GALK1P51570 392 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 TAF1AQ15573 450 aaPredicted RBP28.05■■■□□ 2.08
CGREF1-207ENST00000440612 CDKN3Q16667 212 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 HNRNPA1L2Q32P51 320 aaKnown RBP28.05■■■□□ 2.08
CGREF1-207ENST00000440612 TXNDC11Q6PKC3 985 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 TRABD2AQ86V40 505 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 RASSF3Q86WH2 238 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 CNTN4Q8IWV2 1026 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 EID2BQ96D98 161 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 HEPHQ9BQS7 1158 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 MAGEE1Q9HCI5 957 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 ZFATQ9P243 1243 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 PPIL1Q9Y3C6 166 aa28.05■■■□□ 2.08
CGREF1-207ENST00000440612 CCL22O00626 93 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 SIN3BO75182 1162 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 UGT2B4P06133 528 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 CREB1P16220 341 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 CTPS1P17812 591 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 ST8SIA6P61647 398 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 GRM3Q14832 879 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 DEFB123Q8N688 67 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 OR13C4Q8NGS5 318 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 CDKL2Q92772 493 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 DNAJC1Q96KC8 554 aaKnown RBP28.04■■■□□ 2.08
CGREF1-207ENST00000440612 THAP10Q9P2Z0 257 aaPredicted RBP28.04■■■□□ 2.08
CGREF1-207ENST00000440612 SLC8A2Q9UPR5 921 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 STARD13Q9Y3M8 1113 aa28.04■■■□□ 2.08
CGREF1-207ENST00000440612 POLR3GO15318 223 aaPredicted RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 HLA-EP13747 358 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 RECQLP46063 649 aaPredicted RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 GYS2P54840 703 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 C9orf64Q5T6V5 341 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 EMC10Q5UCC4 262 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 PACS1Q6VY07 963 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 GDPD4Q6W3E5 623 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 GLT6D1Q7Z4J2 308 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 GRIN3AQ8TCU5 1115 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 CSGALNACT1Q8TDX6 532 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 STMN4Q9H169 189 aaPredicted RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 LEFTY1O75610 366 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 CRTAMO95727 393 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 F7P08709 466 aaPredicted RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 RAD51Q06609 339 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 LAMB3Q13751 1172 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 LEXMQ3ZCV2 418 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 FNDC3BQ53EP0 1204 aaKnown RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 PLCD3Q8N3E9 789 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 STYXQ8WUJ0 223 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 ACOX2Q99424 681 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 IARS2Q9NSE4 1012 aaKnown RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 NLE1Q9NVX2 485 aaPredicted RBP28.03■■■□□ 2.08
CGREF1-207ENST00000440612 HACD3Q9P035 362 aa28.03■■■□□ 2.08
CGREF1-207ENST00000440612 A0A1W2PPM1 405 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 PAMP19021 973 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 CTHP32929 405 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 HNF1BP35680 557 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 IL12RB1P42701 662 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 EPHB1P54762 984 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 ARSIQ5FYB1 569 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 EGFLAMQ63HQ2 1017 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 HDAC10Q969S8 669 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 TBATAQ96M53 351 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 KLHL32Q96NJ5 620 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 LYSMD1Q96S90 227 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 P2RY13Q9BPV8 354 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 ZDHHC4Q9NPG8 344 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 ZNF711Q9Y462 761 aa28.02■■■□□ 2.08
CGREF1-207ENST00000440612 TSPAN11A1L157 253 aa28.01■■■□□ 2.07
CGREF1-207ENST00000440612 SLC7A4O43246 635 aa28.01■■■□□ 2.07
CGREF1-207ENST00000440612 APODP05090 189 aa28.01■■■□□ 2.07
CGREF1-207ENST00000440612 ENPP2Q13822 863 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms