RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 ITPKBP27987 946 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 SCNN1BP51168 640 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 BLKP51451 505 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 TMCO3Q6UWJ1 677 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 FSTL5Q8N475 847 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-204ENST00000440437 PLA2G15Q8NCC3 412 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 TSACCQ96A04 125 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-204ENST00000440437 IQCDQ96DY2 449 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 BTBD6Q96KE9 485 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL16A1-204ENST00000440437 ABCG4Q9H172 646 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 PCDH18Q9HCL0 1135 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 ANAPC7Q9UJX3 599 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 NENFQ9UMX5 172 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 OR1A2Q9Y585 309 aa16.9■□□□□ 0.3
COL16A1-204ENST00000440437 TTC24A2A3L6 582 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-204ENST00000440437 HTRA2O43464 458 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-204ENST00000440437 RECQL5O94762 991 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-204ENST00000440437 RASGRP1O95267 797 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 ELFN1P0C7U0 828 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 HTR1BP28222 390 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 ACTN2P35609 894 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 HSPA9P38646 679 aaKnown RBP16.89■□□□□ 0.29
COL16A1-204ENST00000440437 KIAA1024LP59773 190 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 ZNF235Q14590 738 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 ELOCQ15369 112 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 KIF26BQ2KJY2 2108 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 ISXQ2M1V0 245 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 KCTD16Q68DU8 428 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 ENPP7Q6UWV6 458 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 HID1Q8IV36 788 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 PGBD5Q8N414 524 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 FGF11Q92914 225 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 GLMNQ92990 594 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 WDR92Q96MX6 357 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 MGME1Q9BQP7 344 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 NUP85Q9BW27 656 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 IP6K2Q9UHH9 426 aa16.89■□□□□ 0.29
COL16A1-204ENST00000440437 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 SOCS5O75159 536 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 USP12O75317 370 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 DXOO77932 396 aaKnown RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 MPOP05164 745 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 ALPIP09923 528 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 RPIAP49247 311 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 SRP54P61011 504 aaKnown RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 POLR2LP62875 67 aaKnown RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 GABREP78334 506 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 SOWAHCQ53LP3 525 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 ALKBH5Q6P6C2 394 aaKnown RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 LVRNQ6Q4G3 990 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 CRTC1Q6UUV9 634 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 SDR16C5Q8N3Y7 309 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 PCDH19Q8TAB3 1148 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 NAT6Q93015 286 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 PDXPQ96GD0 296 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 NUDCD1Q96RS6 583 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 RCOR3Q9P2K3 495 aaPredicted RBP16.88■□□□□ 0.29
COL16A1-204ENST00000440437 B4GALT6Q9UBX8 382 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 KLQ9UEF7 1012 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 DGKBQ9Y6T7 804 aa16.88■□□□□ 0.29
COL16A1-204ENST00000440437 A0A1W2PNU3 283 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 CASC3O15234 703 aaKnown RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 RRP8O43159 456 aaKnown RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 TCEA3O75764 348 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 CTSEP14091 401 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 IL4RP24394 825 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 SERPINB6P35237 376 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 TRIM23P36406 574 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 LSSP48449 732 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 PDX1P52945 283 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 ESRP1Q6NXG1 681 aaKnown RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 LRRC69Q6ZNQ3 347 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 PELI3Q8N2H9 469 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 ATPAF2Q8N5M1 289 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 ARL10Q8N8L6 244 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 KYQ8NBH2 561 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 ATL2Q8NHH9 583 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 FUBP1Q96AE4 644 aaKnown RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 ZNF578Q96N58 590 aaPredicted RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 RBM15Q96T37 977 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 CCDC3Q9BQI4 270 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 POLR1BQ9H9Y6 1135 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 IFNKQ9P0W0 207 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 PADI4Q9UM07 663 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 LUC7L2Q9Y383 392 aaKnown RBP16.87■□□□□ 0.29
COL16A1-204ENST00000440437 PCDHGC4Q9Y5F7 938 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 ENTPD2Q9Y5L3 495 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 PTPRQQ9UMZ3 2332 aa16.87■□□□□ 0.29
COL16A1-204ENST00000440437 SCN8AQ9UQD0 1980 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 ARHGEF17Q96PE2 2063 aaPredicted RBP16.86■□□□□ 0.29
COL16A1-204ENST00000440437 A0A1W2PQ67 120 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 TMEM202A6NGA9 273 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 GOLGA6L19H0YKK7 550 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 CPP00450 1065 aa16.86■□□□□ 0.29
COL16A1-204ENST00000440437 HOXC4P09017 264 aaPredicted RBP16.86■□□□□ 0.29
COL16A1-204ENST00000440437 CD48P09326 243 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms