RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ARL5AQ9Y689 179 aa13.61□□□□□ -0.23
HERPUD1-204ENST00000439977 MRASO14807 208 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 TPST1O60507 370 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 B4GALT3O60512 393 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 CELF2O95319 508 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SLC7A2P52569 658 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 FOXA1P55317 472 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 EFEMP1Q12805 493 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 KIF19Q2TAC6 998 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 MARC1Q5VT66 337 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 KDELC1Q6UW63 502 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 CILP2Q8IUL8 1156 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 TTC9BQ8N6N2 239 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 PTERQ96BW5 349 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 PRICKLE1Q96MT3 831 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 HEATR9A2RTY3 570 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF839A8K0R7 811 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 VILLO15195 856 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 FGF10O15520 208 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 TIPRLO75663 272 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 PEX11BO96011 259 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 CHRM3P20309 590 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 DNAJB2P25686 324 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 RPL9P32969 192 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 MLLT6P55198 1093 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 USP46P62068 366 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 TSPY1Q01534 308 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 PFKPQ01813 784 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 LRP8Q14114 963 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ADCY4Q8NFM4 1077 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SMOC2Q9H3U7 446 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 GSTO2Q9H4Y5 243 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 EGFL7Q9UHF1 273 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 GIT1Q9Y2X7 761 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SNRPB2P08579 225 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 UGT1A6P19224 532 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ARPP19P56211 112 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 STX5Q13190 355 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 GALNT3Q14435 633 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 CAPRIN1Q14444 709 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 HERC3Q15034 1050 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SIRPB2Q5JXA9 342 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ISCA2Q86U28 154 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 LZTR1Q8N653 840 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ZFP28Q8NHY6 868 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SLCO4A1Q96BD0 722 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ASB9Q96DX5 294 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 PKMYT1Q99640 499 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 SP110Q9HB58 689 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 BCAP29Q9UHQ4 241 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 VPS28Q9UK41 221 aa13.6□□□□□ -0.23
HERPUD1-204ENST00000439977 A0A1B0GTL3 188 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 FAM149AA5PLN7 773 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 TNFRSF10BO14763 440 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ALDOCP09972 364 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 FAM163BP0C2L3 166 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF26P17031 533 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF135P52742 658 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 SH3BP2P78314 561 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ECT2LQ008S8 904 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 VPS26BQ4G0F5 336 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 RAP1GAP2Q684P5 730 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 TIGD7Q6NT04 549 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 OR13C4Q8NGS5 318 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 SMIM14Q96QK8 99 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 SLC25A51Q9H1U9 297 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 EML4Q9HC35 981 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 RAB26Q9ULW5 256 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 BTRCQ9Y297 605 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 PRG3Q9Y2Y8 225 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 PDCD11Q14690 1871 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 NR5A2O00482 541 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 CLGNO14967 610 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF189O75820 626 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 S1PR4O95977 384 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 MMP2P08253 660 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 FAM58BPP0C7Q3 252 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ADSLP30566 484 aaPredicted RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 GRIA3P42263 894 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 LEPRP48357 1165 aaKnown RBP13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 HK2P52789 917 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 DNAJB13P59910 316 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 LSAMPQ13449 338 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 KLHDC10Q6PID8 442 aa13.59□□□□□ -0.23
HERPUD1-204ENST00000439977 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms