RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 RCCD1A6NED2 376 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 H3BM21 787 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 ENC1O14682 589 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 FFAR2O15552 330 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 PGLSO95336 258 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 HLA-DQB2P05538 268 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 HNRNPKP61978 463 aaKnown RBP eCLIP24.13■■□□□ 1.45
CPNE1-217ENST00000439669 PPIDQ08752 370 aaKnown RBP24.13■■□□□ 1.45
CPNE1-217ENST00000439669 AP1B1Q10567 949 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 PDK1Q15118 436 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 HS1BP3Q53T59 392 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 LIPIQ6XZB0 460 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 RAB44Q7Z6P3 723 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-217ENST00000439669 TPCN2Q8NHX9 752 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 SPOCK2Q92563 424 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 AMACRQ9UHK6 382 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 KLK13Q9UKR3 277 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 PHTF1Q9UMS5 762 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 REXO2Q9Y3B8 237 aaKnown RBP24.13■■□□□ 1.45
CPNE1-217ENST00000439669 LRRK1Q38SD2 2015 aa24.13■■□□□ 1.45
CPNE1-217ENST00000439669 COL5A1P20908 1838 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-217ENST00000439669 KCNK1O00180 336 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 PPP1R12AO14974 1030 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-217ENST00000439669 RECQL5O94762 991 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-217ENST00000439669 NME1P15531 152 aaKnown RBP24.12■■□□□ 1.45
CPNE1-217ENST00000439669 CDKN2BP42772 138 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 YPEL5P62699 121 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 ACOX1Q15067 660 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 LLGL1Q15334 1064 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 KAZNQ674X7 775 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 ALG1LQ6GMV1 187 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 SPOCD1Q6ZMY3 1216 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 KIAA1328Q86T90 577 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 SLC25A45Q8N413 288 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 SALL4Q9UJQ4 1053 aa24.12■■□□□ 1.45
CPNE1-217ENST00000439669 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.12■■□□□ 1.45
CPNE1-217ENST00000439669 TDRD6O60522 2096 aaKnown RBP24.11■■□□□ 1.45
CPNE1-217ENST00000439669 GOLGA6L6A8MZA4 724 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 TOR1BO14657 336 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 JCHAINP01591 159 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 CSF2P04141 144 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 CYP2A6P11509 494 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-217ENST00000439669 KRT10P13645 584 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 JUNDP17535 347 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 CES1P23141 567 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 VIPR1P32241 457 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 MARCKSL1P49006 195 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 EIF2B5Q13144 721 aaKnown RBP24.11■■□□□ 1.45
CPNE1-217ENST00000439669 TFDP2Q14188 446 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 AGERQ15109 404 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 DENND2CQ68D51 928 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 USP45Q70EL2 814 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 CCDC50Q8IVM0 306 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 SEPT10Q9P0V9 454 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 NEUROG3Q9Y4Z2 214 aa24.11■■□□□ 1.45
CPNE1-217ENST00000439669 CTPS1P17812 591 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 CA4P22748 312 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 VAV2P52735 878 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 IFI35P80217 286 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-217ENST00000439669 ZBTB17Q13105 803 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 DNAJC3Q13217 504 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 INPP5AQ14642 412 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 CNGA3Q16281 694 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 MACC1Q6ZN28 852 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 KATNAL2Q8IYT4 538 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 NDUFAF2Q8N183 169 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 ZNF548Q8NEK5 533 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-217ENST00000439669 OLFM3Q96PB7 478 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 DUSP10Q9Y6W6 482 aa24.1■■□□□ 1.45
CPNE1-217ENST00000439669 NEMP2A6NFY4 417 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 TRIM38O00635 465 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 SIGLEC6O43699 453 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 CST8O60676 142 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 HEXIM1O94992 359 aaKnown RBP24.09■■□□□ 1.45
CPNE1-217ENST00000439669 ZRANB2O95218 330 aaKnown RBP eCLIP24.09■■□□□ 1.451e-6■■□□□ 12.9
CPNE1-217ENST00000439669 PDHA1P08559 390 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 ALPPL2P10696 532 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 HTR1BP28222 390 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 EPHB1P54762 984 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 NIPAL4Q0D2K0 466 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 MTM1Q13496 603 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 ARHGEF7Q14155 803 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 TMEM139Q8IV31 216 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 PHACTR4Q8IZ21 702 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 RCOR2Q8IZ40 523 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 RBFAQ8N0V3 343 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 OR4C6Q8NH72 309 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 ARRDC2Q8TBH0 407 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 KRT35Q92764 455 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 RBM41Q96IZ5 413 aaKnown RBP24.09■■□□□ 1.45
CPNE1-217ENST00000439669 CALR3Q96L12 384 aaKnown RBP24.09■■□□□ 1.45
CPNE1-217ENST00000439669 IL12RB2Q99665 862 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 APOOQ9BUR5 198 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 CEP41Q9BYV8 373 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 LACRTQ9GZZ8 138 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 APOBEC3BQ9UH17 382 aaKnown RBP24.09■■□□□ 1.45
CPNE1-217ENST00000439669 KLF15Q9UIH9 416 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 OR1A2Q9Y585 309 aa24.09■■□□□ 1.45
CPNE1-217ENST00000439669 NPIPB15A6NHN6 443 aaPredicted RBP24.08■■□□□ 1.45
CPNE1-217ENST00000439669 BTNL10A8MVZ5 291 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms