RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 EMP3P54852 163 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 EFEMP1Q12805 493 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PMS2P3Q13401 168 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 LAPTM4AQ15012 233 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CYP51A1Q16850 503 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 FAM83EQ2M2I3 478 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TIGD5Q53EQ6 642 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 KIAA0319Q5VV43 1072 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 SPATA2LQ8IUW3 424 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 SMOQ99835 787 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 OSBPL11Q9BXB4 747 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TMEM30AQ9NV96 361 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 FAM159BA6NKW6 160 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PRKCGP05129 697 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 GRK2P25098 689 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PPARGP37231 505 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PBX3P40426 434 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PNPLA4P41247 253 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 IST1P53990 364 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TBCCQ15814 346 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 TAC4Q86UU9 113 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 RALGPS2Q86X27 583 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 KIAA2013Q8IYS2 634 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 C3orf58Q8NDZ4 430 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 DDI1Q8WTU0 396 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CASP10Q92851 521 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 ADAM2Q99965 735 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 HEPHQ9BQS7 1158 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 BEGAINQ9BUH8 593 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 ABCG8Q9H221 673 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 ALG2Q9H553 416 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 FANCEQ9HB96 536 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PLGRKTQ9HBL7 147 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 FAM105AQ9NUU6 356 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CNOT6Q9ULM6 557 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 PPME1Q9Y570 386 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 CORINQ9Y5Q5 1042 aa9.99□□□□□ -0.81
CDC42SE1-202ENST00000439374 HEATR9A2RTY3 570 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 NT5C1B-RDH14C9J2C7 533 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 H3BMM5 538 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 AURKAO14965 403 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 IL7RP16871 459 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PRKCHP24723 683 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 NSUN2Q08J23 767 aaKnown RBP eCLIP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SEMA5AQ13591 1074 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PTPRCAPQ14761 206 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 POLD3Q15054 466 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 FAM187BQ17R55 369 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 KCTD8Q6ZWB6 473 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 CHSY3Q70JA7 882 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZDHHC17Q8IUH5 632 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 MARVELD2Q8N4S9 558 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 FIBCD1Q8N539 461 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SLC15A4Q8N697 577 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 BLOC1S5Q8TDH9 187 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 VPS33AQ96AX1 596 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PLEKHA8Q96JA3 519 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 EXOC2Q96KP1 924 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 RNF145Q96MT1 663 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PTPN18Q99952 460 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 RTKNQ9BST9 563 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 FRMD8Q9BZ67 464 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SPC25Q9HBM1 224 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 UTP6Q9NYH9 597 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 RIMS3Q9UJD0 308 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRRC14BA6NHZ5 514 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PTGESO14684 152 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PENKP01210 267 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ECT2LQ008S8 904 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 NRG1Q02297 640 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 PGM2L1Q6PCE3 622 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 MAMDC4Q6UXC1 1216 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ARCQ7LC44 396 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 STRADAQ7RTN6 431 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 DHFR2Q86XF0 187 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SIX5Q8N196 739 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SMG8Q8ND04 991 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 BTBD9Q96Q07 612 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SEPT5Q99719 369 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 EFHD1Q9BUP0 239 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 C1orf50Q9BV19 199 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SMOXQ9NWM0 555 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ATAD5Q96QE3 1844 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 OR51F1A6NGY5 319 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 TTC36A6NLP5 189 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 UBDO15205 165 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 GRK4P32298 578 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SH3BGRP55822 239 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 LAPTM5Q13571 262 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 HNRNPDQ14103 355 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 TGFBIQ15582 683 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 TAZQ16635 292 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZNF423Q2M1K9 1284 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SLC39A12Q504Y0 691 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 OVOS1Q6IE37 1185 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 FSTL5Q8N475 847 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRRC39Q96DD0 335 aa9.98□□□□□ -0.81
CDC42SE1-202ENST00000439374 SPATA17Q96L03 361 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms