RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 KRT73Q86Y46 540 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 Q8N9G6 341 aaPredicted RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 TBCDQ9BTW9 1192 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CARS2Q9HA77 564 aaKnown RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 NFKBIL1Q9UBC1 381 aaPredicted RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 ANKRD65E5RJM6 399 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 TRIM13O60858 407 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 EPN2O95208 641 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 C4BPAP04003 597 aaKnown RBP12.14□□□□□ -0.47
NEK1-201ENST00000439128 ACTR1BP42025 376 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ACTR1AP61163 376 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ECT2LQ008S8 904 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 NAB1Q13506 487 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ITPRIPL2Q3MIP1 535 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 ARSIQ5FYB1 569 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 C16orf46Q6P387 395 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 PLD3Q8IV08 490 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 CCDC185Q8N715 623 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 OR4K2Q8NGD2 314 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 PIGKQ92643 395 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 AIF1LQ9BQI0 150 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 TMCO1Q9UM00 188 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 PCDHGC4Q9Y5F7 938 aa12.14□□□□□ -0.47
NEK1-201ENST00000439128 C9IYK1 514 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ENPP3O14638 875 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 CHADO15335 359 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ALBP02768 609 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 NTRK1P04629 796 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 TRAF2Q12933 501 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 AADACL2Q6P093 401 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 RIPOR1Q6ZS17 1223 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ZNF366Q8N895 744 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ZSCAN1Q8NBB4 408 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 NSL1Q96IY1 281 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 SUSD3Q96L08 255 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 MAGEH1Q9H213 219 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 INSL5Q9Y5Q6 135 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 AK5Q9Y6K8 562 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 IGLV3-22A0A075B6J6 115 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 H3BNH8 94 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 PAPSS1O43252 624 aaPredicted RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 PPP1R37O75864 691 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ITPKAP23677 461 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 CARD16Q5EG05 197 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ATG16L2Q8NAA4 619 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 GLOD4Q9HC38 313 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 SNX10Q9Y5X0 201 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 TPP1O14773 563 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 PDHA1P08559 390 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ZNF563Q8TA94 476 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 CPXM1Q96SM3 734 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 DPYSL5Q9BPU6 564 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 NEUROD4Q9HD90 331 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ADPRHL2Q9NX46 363 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 HCN3Q9P1Z3 774 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 C9J4A7 227 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 MATN4O95460 622 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 TBX18O95935 607 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 KRT8P05787 483 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 TCEA1P23193 301 aaKnown RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 YBEYP58557 167 aaPredicted RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ZNF776Q68DI1 518 aaPredicted RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 PDE12Q6L8Q7 609 aaKnown RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 BHLHB9Q6PI77 547 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 XYLT1Q86Y38 959 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 CENPTQ96BT3 561 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 JMJD7P0C870 316 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 AGXTP21549 392 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 PEX19P40855 299 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 MAPKAPK2P49137 400 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 DSC2Q02487 901 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 PMF1Q6P1K2 205 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 MACC1Q6ZN28 852 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 LRP10Q7Z4F1 713 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 TMPRSS11BQ86T26 416 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ADAMTSL2Q86TH1 951 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ZNF248Q8NDW4 579 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ADCY4Q8NFM4 1077 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 ASB2Q96Q27 587 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 KCTD15Q96SI1 283 aaPredicted RBP12.13□□□□□ -0.47
NEK1-201ENST00000439128 CYP8B1Q9UNU6 501 aa12.13□□□□□ -0.47
NEK1-201ENST00000439128 TCRBV21S2A2A0A5A6 115 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 CLDN4O14493 209 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 CSTF2P33240 577 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEK1-201ENST00000439128 RUNX1T1Q06455 604 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 PTPN20Q4JDL3 420 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 ZCCHC10Q8TBK6 192 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 SLC22A17Q8WUG5 538 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 VPS33AQ96AX1 596 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 NUS1Q96E22 293 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 261.7 ms