RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 IL17REQ8NFR9 667 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 NUDCD2Q8WVJ2 157 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ST8SIA4Q92187 359 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZBTB10Q96DT7 871 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZNF333Q96JL9 665 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 MPHOSPH8Q99549 860 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 IFT27Q9BW83 186 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 POLDIP3Q9BY77 421 aaKnown RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 PAIP1Q9H074 479 aaKnown RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 TTC12Q9H892 705 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 UBN1Q9NPG3 1134 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 HDAC6Q9UBN7 1215 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 CD207Q9UJ71 328 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 SLC13A4Q9UKG4 626 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ABT1Q9ULW3 272 aaKnown RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 MYO6Q9UM54 1294 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ICKQ9UPZ9 632 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 DHDHQ9UQ10 334 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 KIF1AQ12756 1690 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 CICQ96RK0 1608 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 GPRASP1Q5JY77 1395 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 ANKRD30BQ9BXX2 1392 aa3.51□□□□□ -1.85
HMGB3P12-201ENST00000438745 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM90A7PA6NKC0 464 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM90A22PA8MWA6 464 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM90A12PA8MX19 464 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM90A23PA8MXZ1 464 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 J3KRW8 73 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 HSPB6O14558 160 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 PER2O15055 1255 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 HBP1O60381 514 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TMCC1O94876 653 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 GLUD1P00367 558 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 CD53P19397 219 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TNFAIP3P21580 790 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 PSMC2P35998 433 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 SKIV2L2P42285 1042 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 MTNR1AP48039 350 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 GLUD2P49448 558 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 PMS2P54278 862 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 NR1H2P55055 460 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TMPRSS3P57727 454 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 DSCR9P59020 149 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 DSC1Q08554 894 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TBL3Q12788 808 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TBX2Q13207 712 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 GPR18Q14330 331 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 ASIC2Q16515 512 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 SYTL3Q4VX76 610 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 DNTTIP2Q5QJE6 756 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FNBP1LQ5T0N5 605 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM69AQ5T7M9 428 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 INTS11Q5TA45 600 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 OTUD1Q5VV17 481 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAM83HQ6ZRV2 1179 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TRIM74Q86UV6 250 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TRIM73Q86UV7 250 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 DCP1BQ8IZD4 617 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 SMRP1Q8NCR6 262 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 LSM14AQ8ND56 463 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 DNAAF1Q8NEP3 725 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 FAR1Q8WVX9 515 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 ZUFSPQ96AP4 578 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 ELP4Q96EB1 424 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 RNF125Q96EQ8 232 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 APOPT1Q96IL0 206 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 MPP4Q96JB8 637 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 CD180Q99467 661 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 EYA3Q99504 573 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 NPLQ9BXD5 320 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 LMAN2LQ9H0V9 348 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 CXorf56Q9H5V9 222 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 CATSPERBQ9H7T0 1116 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 SMC4Q9NTJ3 1288 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 NLKQ9UBE8 527 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 CNOT7Q9UIV1 285 aaKnown RBP3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 CDH22Q9UJ99 828 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 TBX20Q9UMR3 447 aa3.5□□□□□ -1.85
HMGB3P12-201ENST00000438745 MYO5BQ9ULV0 1848 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 CNTNAP2Q9UHC6 1331 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 TCF20Q9UGU0 1960 aaKnown RBP3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 C17orf102A2RUQ5 167 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 MS4A18H0YCH9 400 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 ACOT8O14734 319 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 TNPO2O14787 897 aaKnown RBP3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 RNMTO43148 476 aaKnown RBP3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 EPB41L2O43491 1005 aaKnown RBP3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 DDAH2O95865 285 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 IL1AP01583 271 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 ACAA1P09110 424 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 ENO3P13929 434 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 ABCD3P28288 659 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 KRT9P35527 623 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 AVPR1AP37288 418 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 PAFAH1B1P43034 410 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 CDH15P55291 814 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 VAMP2P63027 116 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 SLC18A3Q16572 532 aa3.49□□□□□ -1.85
HMGB3P12-201ENST00000438745 GJB7Q6PEY0 223 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms