RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RPL7AP62424 266 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SETQ01105 290 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 EGR4Q05215 589 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TRAF2Q12933 501 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CTTNQ14247 550 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SHBQ15464 509 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SOWAHAQ2M3V2 549 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 LRRC8EQ6NSJ5 796 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CDC73Q6P1J9 531 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TMTC3Q6ZXV5 915 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 FBXL14Q8N1E6 418 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SCCPDHQ8NBX0 429 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 OR14A16Q8NHC5 309 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ETNPPLQ8TBG4 499 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TRIB2Q92519 343 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SDF4Q9BRK5 362 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 MMTAG2Q9BU76 263 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 RANBP17Q9H2T7 1088 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 PLEKHA4Q9H4M7 779 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 BPIFA1Q9NP55 256 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 UTYO14607 1347 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 A0A1B0GVM2 712 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NPIPB15A6NHN6 443 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 PROB1E7EW31 1015 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 WNT9BO14905 357 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 BCAT2O15382 392 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SMAD6O43541 496 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TIPRLO75663 272 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 GFPT2O94808 682 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CCNDBP1O95273 360 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CLEC3BP05452 202 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 MMP2P08253 660 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 SPARCP09486 303 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ITGAXP20702 1163 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 AGAP20933 346 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 PSMA4P25789 261 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 HOXA11P31270 313 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CDAP32320 146 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 BSGP35613 385 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 RPL3P39023 403 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 RGS2P41220 211 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 RARSP54136 660 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NAP1L1P55209 391 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ARF3P61204 181 aaPredicted RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 RPS3AP61247 264 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ABATP80404 500 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ARF1P84077 181 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 CRYZQ08257 329 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 GRIK3Q13003 919 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TDRD12Q587J7 1177 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 EFHC1Q5JVL4 640 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TDRPQ86YL5 185 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 DHX40Q8IX18 779 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZCCHC9Q8N567 271 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NGEFQ8N5V2 710 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 AADATQ8N5Z0 425 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 BEST2Q8NFU1 509 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 ARRDC2Q8TBH0 407 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NEK9Q8TD19 979 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 MIB2Q96AX9 1013 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 FAM149B1Q96BN6 582 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TIGD1Q96MW7 591 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NTPCRQ9BSD7 190 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TMEM204Q9BSN7 226 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 MAGEE1Q9HCI5 957 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 OR6C3Q9NZP0 311 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 WNT16Q9UBV4 365 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 AGO1Q9UL18 857 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 AAR2Q9Y312 384 aaKnown RBP3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 NFE2L3Q9Y4A8 694 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 PIAS3Q9Y6X2 628 aa3.78□□□□□ -1.8
TRAPPC13-204ENST00000438419 TDRD9Q8NDG6 1382 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 A6NCN8 305 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 EIF3CLB5ME19 914 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 SEC14L5O43304 696 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 GLUD1P00367 558 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 C21orf33P30042 268 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 GLUD2P49448 558 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 NEDD9Q14511 834 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 TOMM20Q15388 145 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 CCNG2Q16589 344 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 SNX30Q5VWJ9 437 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 TYW3Q6IPR3 259 aaKnown RBP3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 LCTLQ6UWM7 567 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 CCDC129Q6ZRS4 1044 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 LINGO2Q7L985 606 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 GSTA5Q7RTV2 222 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 NOXA1Q86UR1 476 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 FAM216AQ8WUB2 273 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 SMARCE1Q969G3 411 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 PHF21BQ96EK2 531 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 TXNDC15Q96J42 360 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 LYZL4Q96KX0 146 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 LRFN5Q96NI6 719 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 ZNF570Q96NI8 536 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 SLITRK1Q96PX8 696 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 PIP5K1AQ99755 562 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 GLIS2Q9BZE0 524 aaPredicted RBP3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 ASAH2Q9NR71 780 aa3.77□□□□□ -1.81
TRAPPC13-204ENST00000438419 DIAPH3Q9NSV4 1193 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms