RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RAP2CQ9Y3L5 183 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 ENO4A6NNW6 628 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 ITGA2BP08514 1039 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 OR1D2P34982 312 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 PTSQ03393 145 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 CAMK1DQ8IU85 385 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 ZC3H7AQ8IWR0 971 aaKnown RBP15.92■□□□□ 0.14
PTPN13-204ENST00000436978 IL31RAQ8NI17 732 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 KAT5Q92993 513 aa15.92■□□□□ 0.14
PTPN13-204ENST00000436978 MGRN1O60291 552 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 CDK18Q07002 472 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 TARBP2Q15633 366 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 CHSY3Q70JA7 882 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 CKAP2Q8WWK9 683 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 ZNF214Q9UL59 606 aaPredicted RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 TSC22D4Q9Y3Q8 395 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 MTAPQ13126 283 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 KCNA10Q16322 511 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 GRIK5Q16478 980 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PTPRNQ16849 979 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 HDDC2Q7Z4H3 204 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 ASZ1Q8WWH4 475 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PTPRHQ9HD43 1115 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 ITGB5P18084 799 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 GABRB2P47870 512 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 CRADDP78560 199 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RNF43Q68DV7 783 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 FAM151BQ6UXP7 276 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 IKBIPQ70UQ0 350 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RAVER1Q8IY67 606 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 GGA2Q9UJY4 613 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RGSL1A5PLK6 1076 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 NR2F1P10589 423 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PRMT2P55345 433 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 TRAF3Q13114 568 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 CYP4X1Q8N118 509 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 OR4A15Q8NGL6 344 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 CLP1Q92989 425 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PURBQ96QR8 312 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PRDM8Q9NQV8 689 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 H0YC42 278 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 GTPBP1O00178 669 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PROCP04070 461 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RPL22P35268 128 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 GPR158Q5T848 1215 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PEG10Q86TG7 708 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RP9Q8TA86 221 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 MYDGFQ969H8 173 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 NDNQ99608 321 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 TBCDQ9BTW9 1192 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 DUSP4Q13115 394 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PACS1Q6VY07 963 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 ERLEC1Q96DZ1 483 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 FCRL2Q96LA5 508 aaPredicted RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 COPS8Q99627 209 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 LCLAT1Q6UWP7 414 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 RNF44Q7L0R7 432 aa15.91■□□□□ 0.14
PTPN13-204ENST00000436978 PHF10Q8WUB8 498 aaKnown RBP15.91■□□□□ 0.14
PTPN13-204ENST00000436978 A0A087WXM4 84 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 ZNF248Q8NDW4 579 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 REXO5Q96IC2 774 aaKnown RBP15.9■□□□□ 0.14
PTPN13-204ENST00000436978 EFR3BQ9Y2G0 817 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 SERPINA6P08185 405 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 CCNYL3P0C7X3 344 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 CYP2R1Q6VVX0 501 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 MIEF2Q96C03 454 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 PCDH12Q9NPG4 1184 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 TRIM43BA6NCK2 446 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 ZSCAN5DPP0CG00 497 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 CCDC185Q8N715 623 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 ARMCX1Q9P291 453 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 CFAP97Q9P2B7 532 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 MRPL42Q9Y6G3 142 aaKnown RBP15.9■□□□□ 0.14
PTPN13-204ENST00000436978 UGT2B15P54855 530 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 LGALS3BPQ08380 585 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 ABRQ12979 859 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 CEP68Q76N32 757 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 PRDM12Q9H4Q4 367 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 IRGMA1A4Y4 181 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 ERCC2P18074 760 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 ICAM3P32942 547 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 NR1D2Q14995 579 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 FAXDC2Q96IV6 333 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 INPP4AQ96PE3 977 aaPredicted RBP15.9■□□□□ 0.14
PTPN13-204ENST00000436978 PHPT1Q9NRX4 125 aaPredicted RBP15.9■□□□□ 0.14
PTPN13-204ENST00000436978 B4GALT5O43286 388 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 KIAA0408Q6ZU52 694 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 POU5F2Q8N7G0 328 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 CXorf56Q9H5V9 222 aa15.9■□□□□ 0.14
PTPN13-204ENST00000436978 SH3BGRLO75368 114 aa15.89■□□□□ 0.14
PTPN13-204ENST00000436978 RPP40O75818 363 aaKnown RBP15.89■□□□□ 0.14
PTPN13-204ENST00000436978 EOMESO95936 686 aa15.89■□□□□ 0.14
PTPN13-204ENST00000436978 TPSB2P20231 275 aa15.89■□□□□ 0.14
PTPN13-204ENST00000436978 TPSAB1Q15661 275 aa15.89■□□□□ 0.14
PTPN13-204ENST00000436978 GET4Q7L5D6 327 aaPredicted RBP15.89■□□□□ 0.14
PTPN13-204ENST00000436978 MREGQ8N565 214 aa15.89■□□□□ 0.14
PTPN13-204ENST00000436978 RNASE11Q8TAA1 199 aaKnown RBP15.89■□□□□ 0.14
PTPN13-204ENST00000436978 ZSCAN18Q8TBC5 510 aaPredicted RBP15.89■□□□□ 0.14
PTPN13-204ENST00000436978 ZNF184Q99676 751 aaPredicted RBP15.89■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms