RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 CLDN11O75508 207 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 TRUB2O95900 331 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 CENPBP07199 599 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 LIPCP11150 499 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 CD96P40200 585 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 ACADSBP45954 432 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 PDX1P52945 283 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 KRT83P78385 493 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 TLE1Q04724 770 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 DEFB133Q30KQ1 61 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 ZCWPW2Q504Y3 356 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 ALG1LQ6GMV1 187 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 ESRP1Q6NXG1 681 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 TMEM270Q6UE05 265 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 FBXO39Q8N4B4 442 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 OR2A12Q8NGT7 310 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 LMX1AQ8TE12 382 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 CLEC4CQ8WTT0 213 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 TFAP2BQ92481 460 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 LENG8Q96PV6 779 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 SLC17A9Q9BYT1 436 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 MIS12Q9H081 205 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 SLC25A18Q9H1K4 315 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 ADNPQ9H2P0 1102 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 VPS28Q9UK41 221 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 ZFR2Q9UPR6 939 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 NAALADL1Q9UQQ1 740 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 OR51B4Q9Y5P0 310 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 CACNA1DQ01668 2161 aa8.56□□□□□ -1.04
NIF3L1-208ENST00000436412 PMS2P1A4D2B8 440 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 POM121BA6NF01 834 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 FPGTO14772 594 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 AP1G1O43747 822 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 IGLV3-25P01717 112 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 CTSLP07711 333 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 ANXA6P08133 673 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 CELA3AP09093 270 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 SRCP12931 536 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 CCR1P32246 355 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 UGT1A5P35504 534 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 NEK3P51956 506 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 YWHAZP63104 245 aaKnown RBP8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 NFKB2Q00653 900 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 SGCGQ13326 291 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 EIF4EBP2Q13542 120 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 PDE1CQ14123 709 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 MORC3Q14149 939 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 PTK2BQ14289 1009 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 MEA1Q16626 185 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 TBR1Q16650 682 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 LCE1DQ5T752 114 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 SYPL2Q5VXT5 272 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 SEL1L3Q68CR1 1132 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 OR6B2Q6IFH4 312 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 FBXL22Q6P050 247 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 RAB11FIP2Q7L804 512 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 SLC35F3Q8IY50 421 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 DENND6BQ8NEG7 585 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 ASB12Q8WXK4 309 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 TMEM159Q96B96 161 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 RPRD1AQ96P16 312 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 MED15Q96RN5 788 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 CCDC3Q9BQI4 270 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 POPDC2Q9HBU9 364 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 ST7Q9NRC1 585 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 CFAP45Q9UL16 551 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 PADI4Q9UM07 663 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 TBC1D30Q9Y2I9 924 aa8.55□□□□□ -1.04
NIF3L1-208ENST00000436412 CRYBG3Q68DQ2 2970 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CLEC18AA5D8T8 446 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 M0QYT0 321 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 TOR1BO14657 336 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 SLC16A3O15427 465 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 PAK4O96013 591 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CEACAM5P06731 702 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CR2P20023 1033 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 FUT4P22083 530 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CD82P27701 267 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CCKBRP32239 447 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 GPD2P43304 727 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 RECQLP46063 649 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CDH4P55283 916 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CDK17Q00537 523 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 PLCL1Q15111 1095 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 C5orf22Q49AR2 442 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CBWD6Q4V339 395 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CBWD3Q5JTY5 395 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CBWD5Q5RIA9 395 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 MANEAQ5SRI9 462 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 ZBTB37Q5TC79 503 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 TCERG1LQ5VWI1 586 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 LVRNQ6Q4G3 990 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CRTC1Q6UUV9 634 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CLEC18BQ6UXF7 455 aa8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 CIR1Q86X95 450 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-208ENST00000436412 JAMLQ86YT9 394 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms