RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 MMADHCQ9H3L0 296 aaPredicted RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 HMGXB4Q9UGU5 601 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 CSDE1O75534 798 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SERPINA3P01011 423 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 MTHFD1P11586 935 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 BGNP21810 368 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 FOXM1Q08050 763 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ABRAXAS1Q6UWZ7 409 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TMPRSS11AQ6ZMR5 421 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 COPS8Q99627 209 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 CHCHD6Q9BRQ6 235 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ADAM7Q9H2U9 754 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ING4Q9UNL4 249 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PRR36Q9H6K5 1346 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 CXCR3P49682 368 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PGBD2Q6P3X8 592 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 OR4A15Q8NGL6 344 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 UGT2B17O75795 530 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 CFIP05156 583 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ABL2P42684 1182 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 KCNJ5P48544 419 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PSMD8P48556 350 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SPIBQ01892 262 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 CXCL9Q07325 125 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TRAP1Q12931 704 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TAS1R2Q8TE23 839 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 DLG3Q92796 817 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 NSMCE3Q96MG7 304 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 EBNA1BP2Q99848 306 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SEMA4BQ9NPR2 832 aaPredicted RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ARMCX1Q9P291 453 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 LEF1Q9UJU2 399 aaPredicted RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 IKZF2Q9UKS7 526 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 HYKKA2RU49 373 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 C22orf31O95567 290 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 LGALS2P05162 132 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SV2AQ7L0J3 742 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TDRPQ86YL5 185 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PIK3C3Q8NEB9 887 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SETD6Q8TBK2 473 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 DENND1AQ8TEH3 1009 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 DCAKDQ8WVC6 231 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 RBM18Q96H35 190 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 C1orf50Q9BV19 199 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 NR2F6P10588 404 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 GLUD2P49448 558 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 SCNN1GP51170 649 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 TNK2Q07912 1038 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 LAPTM5Q13571 262 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 VPS26BQ4G0F5 336 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 FAM92BQ6ZTR7 304 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 PIGKQ92643 395 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 UNKQ9C0B0 810 aaKnown RBP11.23□□□□□ -0.61
SCN4A-201ENST00000435607 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
SCN4A-201ENST00000435607 G3V2T6 193 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 TRIM38O00635 465 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PER2O15055 1255 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PYDC2Q56P42 97 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 RIOX2Q8IUF8 465 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ALLCQ8N6M5 410 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 DNASE1L2Q92874 299 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SAMD9LQ8IVG5 1584 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 RGSL1A5PLK6 1076 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CHST10O43529 356 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SAGP10523 405 aaPredicted RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 LAMP2P13473 410 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 S100A1P23297 94 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PIK3R6Q5UE93 754 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 TMPRSS6Q8IU80 811 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 P2RX7Q99572 595 aaKnown RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 TTPALQ9BTX7 342 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 DPEP2Q9H4A9 486 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 LDAHQ9H6V9 325 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 NRDE2Q9H7Z3 1164 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 C3orf18Q9UK00 162 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SPEF1Q9Y4P9 236 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CPS1P31327 1500 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 F8VZ95 297 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SLC37A4O43826 429 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PRKAR1AP10644 381 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 DCKP27707 260 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 CDH13P55290 713 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 PPP2R2BQ00005 443 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 DGKZQ13574 1117 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 KCNT2Q6UVM3 1135 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 ZSCAN4Q8NAM6 433 aaPredicted RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 DPF2Q92785 391 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 WDR24Q96S15 920 aa11.22□□□□□ -0.61
SCN4A-201ENST00000435607 GNEQ9Y223 722 aaKnown RBP11.22□□□□□ -0.61
SCN4A-201ENST00000435607 SMCO3A2RU48 225 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms